This repository contains supplementary files, scripts and notebooks of our manuscript entitled Genes with 5' terminal oligopyrimidine tracts preferentially escape global suppression of translation by the SARS-CoV-2 NSP1 protein.
The ribo files, containing ribosome profiling and matched RNA-Seq data, are available in this link.
We used codon-optimized sequences for NSP1 and NSP2 vecotrs. Their sequences are also provided in this repository under reference_sequences folder.