Merge PyChaste into Chaste develop #30
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| name: Ubuntu compilers | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - '**' | |
| push: | |
| branches: | |
| - develop | |
| jobs: | |
| compiler-all-libs: | |
| if: ${{ !contains(github.event.pull_request.labels.*.name, 'ci:off') }} | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - cc: "clang-13" | |
| cxx: "clang++-13" | |
| build-type: "Debug" | |
| - cc: "clang-14" | |
| cxx: "clang++-14" | |
| build-type: "Release" | |
| - cc: "gcc-10" | |
| cxx: "g++-10" | |
| build-type: "Release" | |
| - cc: "gcc-12" | |
| cxx: "g++-12" | |
| build-type: "Debug" | |
| - cc: "icx" | |
| cxx: "icpx" | |
| build-type: "Debug" | |
| - cc: "icx" | |
| cxx: "icpx" | |
| build-type: "Release" | |
| env: | |
| CHASTE_TEST_OUTPUT: ${{ github.workspace }}/chaste-test-dir | |
| CC: ${{ matrix.cc }} | |
| CXX: ${{ matrix.cxx }} | |
| steps: | |
| - name: checkout repository | |
| uses: actions/checkout@v4 | |
| - name: install dependencies | |
| run: | | |
| echo 'deb [signed-by=/usr/share/keyrings/chaste.asc] https://chaste.github.io/ubuntu jammy/' | sudo tee -a /etc/apt/sources.list.d/chaste.list | |
| sudo wget -O /usr/share/keyrings/chaste.asc https://chaste.github.io/chaste.asc | |
| sudo apt update | |
| sudo apt install chaste-dependencies | |
| - name: install and set up Intel LLVM compiler | |
| run: | | |
| echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list | |
| sudo wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null | |
| sudo apt update | |
| sudo apt install intel-oneapi-compiler-dpcpp-cpp | |
| source /opt/intel/oneapi/setvars.sh | |
| printenv >> $GITHUB_ENV | |
| if: ${{ matrix.cc == 'icx' }} | |
| - name: compiler version | |
| run: | | |
| ${CXX} --version | |
| - name: make build and test directories | |
| run: | | |
| mkdir -p chaste-build-dir | |
| mkdir -p ${CHASTE_TEST_OUTPUT} | |
| - name: cmake configure | |
| run: cmake -DCMAKE_BUILD_TYPE=${{ matrix.build-type }} .. | |
| working-directory: chaste-build-dir | |
| - name: build core libraries | |
| run: cmake --build . --parallel 4 --target chaste_core | |
| working-directory: chaste-build-dir | |
| - name: build cell_based | |
| run: cmake --build . --parallel 4 --target chaste_cell_based | |
| working-directory: chaste-build-dir | |
| - name: build crypt | |
| run: cmake --build . --parallel 4 --target chaste_crypt | |
| working-directory: chaste-build-dir | |
| - name: build heart | |
| run: cmake --build . --parallel 4 --target chaste_heart | |
| working-directory: chaste-build-dir | |
| - name: build lung | |
| run: cmake --build . --parallel 4 --target chaste_lung | |
| working-directory: chaste-build-dir |