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Merge PyChaste into Chaste develop #286

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Merge PyChaste into Chaste develop #286

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@kwabenantim kwabenantim self-assigned this Jun 10, 2024
@kwabenantim kwabenantim linked an issue Jun 10, 2024 that may be closed by this pull request
PyChaste Merge #273
Open
@kwabenantim
#273 add pychaste test cmake
e28ff41
@kwabenantim
#273 add pychaste VtkScene
c2deed5
@kwabenantim
#273 Rename codegen env chaste env
d83a160
@kwabenantim
#273 add all pychaste but wrappers and docs
3fe845b
@kwabenantim
#273 add fixed pychaste wrappers
f77729e
@kwabenantim
Merge branch 'develop' into 273-pychaste-merge
631b2ba
@kwabenantim
#273 Add pychaste-test workflow
2ecdd99
@kwabenantim
#273 Add pychaste wrapper diff test
ecf015c
@kwabenantim
#273 Fix pychaste for vtk 9.0
a51678b
@kwabenantim
#273 Move pychaste-test workflow
335678a
@kwabenantim
#273 Remove pychaste component if not enabled
41fd50e
@kwabenantim
#273 Skip pychaste config if disabled
f32eaca
@kwabenantim
#273 Add wrapper fixes from cppwg
ee0d2cb
@kwabenantim
#273 Generate copyright text in pychaste wrappers
1c51632
@kwabenantim
#273 fix pychaste copyright notice whitespace
84d68db
@kwabenantim
#273 Add pychaste continuous test pack
be3ffb4
@kwabenantim
#273 Generate missing pychaste wrappers in cmake
651108b
@kwabenantim
#273 Restructure pychaste layout
17088d5
@kwabenantim
#273 Update pychaste-test actions
a42dcc4
@kwabenantim
#273 Add pychaste tutorials
3a42207
@kwabenantim
#273 Organise pychaste cpp and py code under src
2b37be5
@kwabenantim
#273 Fix pychaste test paths
ce92267
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codecov bot commented Aug 18, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 100.00%. Comparing base (b3b2fad) to head (3a42207).
Report is 14 commits behind head on develop.

Additional details and impacted files 
@@            Coverage Diff            @@
##           develop      #286   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files         1029      1029           
  Lines        51383     51383           
=========================================
  Hits         51383     51383

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

This was linked to issues Sep 10, 2024
Test Chaste/PyChaste Diff Chaste/PyChaste#48
Closed
Add PyChaste Test Suite to Chaste CI Chaste/PyChaste#49
Open
kwabenantim and others added 26 commits September 15, 2024 00:36
@kwabenantim
#273 Test for new classes
0ff301a
@kwabenantim
#273 Add modification notice to wrappers
90d6433
@kwabenantim
#273 Rename pychaste tests
dbdd477
@kwabenantim
#273 update pychaste workflow
1637524
@kwabenantim
#273 Fix TestPyFileFinder
87469de
@MILeach
wrap PetscSetupUtils & setup petsc in python test
7bb70e7
@kwabenantim
Merge pull request #315 from Chaste/273-pychaste-merge-fix-petsc-setup
0b6951a 
wrap PetscSetupUtils & setup petsc in python test
@kwabenantim
#273 Add SetupTestPyWrapperChanges
be1afb7
@kwabenantim
#273 Expand TestPyWrapperChanges
caf6ea4
@kwabenantim
#273 Update TestPyWrapperChanges
f931d06
@kwabenantim
#273 Update pychaste workflow
1c7bd9c
@kwabenantim
#273 Turn off vtk warnings VtkScene tests
c5eb959
@kwabenantim
#273 Auto-sorted pychaste wrappers
3e36752
@kwabenantim
#273 Flatten generated wrapper structure
7191d14
@kwabenantim
#273 Rename pychaste wrappers
b34ba0c
@kwabenantim
#273 rename _pychaste_pychaste _pychaste_lib
46f8a8f
@kwabenantim
#273 Add pychaste template syntax
685be4a
@kwabenantim
Merge branch 'develop' into 273-pychaste-merge
337409c
@kwabenantim
#273 Update VertexMesh and MeshBasedCellPopulation wrappers
5c94a2f
@kwabenantim
#273 Rename pychaste lib.main.cpp
a2cafa9
@kwabenantim
#273 Remove unused AbstractPythonOdeSystemInformation
9fabcba
@kwabenantim
#273 Format pychaste cpp code
9fac882
@kwabenantim
#273 Update TestPyImports
4d21224
@kwabenantim
#273 Fix pychaste test name consistency
2cd3114
@kwabenantim
#273 Update pychaste wrapper config
9972ef1
@kwabenantim
#273 Accept classes in TemplateClassDict
1aca2ca
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Successfully merging this pull request may close these issues.

PyChaste Merge Add PyChaste Test Suite to Chaste CI Test Chaste/PyChaste Diff
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@kwabenantim @MILeach