GitHub - Chaste/project_Plos2013: Git conversion of old SVN user project Plos2013

Chaste / project_Plos2013 Public

Notifications You must be signed in to change notification settings
Fork 0
Star 0

Git conversion of old SVN user project Plos2013

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 13 Commits
src		src
test		test
videos		videos
.project		.project
CMakeLists.txt		CMakeLists.txt
README.txt		README.txt
SConscript		SConscript
Summary.wiki		Summary.wiki

Repository files navigation

README.txt

 Created on: 8th  May 2012
 Updated on: 31st Jan 2013
 Updated on: 16th Jun 2015 (to work with v3.3 and up to r24460)
 Updated on: 16th Feb 2016 (to work with v3.4 and up to r26040)
 
     Author: Gary Mirams
     
This project contains all the code required to recreate the results in the PloS 2013 paper.

It must be checked out into

<chaste directory>/projects/Plos2013 

in order for file paths to be picked up correctly, and it should be used with Chaste v3.4

To run the examples you should do (for example):
cd <chaste directory>
scons build=GccOpt test_suite=projects/Plos2013/test/TestCryptsAndVillusLiteratePaper.hpp

There is a Chaste wiki page associated with this project that gives links to more information on Chaste installation,
and the example simulations that are in the 'test' folder:
https://chaste.cs.ox.ac.uk/cgi-bin/trac.cgi/wiki/PaperTutorials/Plos2013