Skip to content

Commit

Permalink
add instructions
Browse files Browse the repository at this point in the history
  • Loading branch information
ChenfuShi committed Jul 2, 2024
1 parent bc72609 commit f162186
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion integration_analysis/Everything_printer_public.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,8 @@
"source": [
"## script that allows the display of the information from the publicly released data\n",
"\n",
"insert SNPs or list of SNPs and call function.\n",
"### instructions\n",
"Execute all the cells, then head to the bottom and insert a SNP or a list of SNPs and execute that cell. This will call the function that retrieves the data that matches that SNP across all the datasets that have been released.\n",
"\n",
"For QTLs we can print nominal p-values for all SNPs but FDR corrected p-values are only available for the top SNP for each locus. So we print both to get an idea of your locus (e.g. if your SNP is not top SNP but it's highly correlated with the top SNP then it's probably still significant)"
]
Expand Down

0 comments on commit f162186

Please sign in to comment.