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Implement Common (reference) space resampling #41

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gdevenyi opened this issue Jul 5, 2022 · 5 comments
Open

Implement Common (reference) space resampling #41

gdevenyi opened this issue Jul 5, 2022 · 5 comments

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@gdevenyi
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gdevenyi commented Jul 5, 2022

Need to be able to automatically generate transforms to a reference space if provided and produce DBM outputs in that space.

Q: does it happen in model and dbm, or just dbm?

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gdevenyi commented Jul 7, 2022

This should go in the DBM part, since the base modelbuilding code should be strictly limited to just modelbuilding.

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I now think this should go in the modelbuilding section because this may be needed by users to move subject-level measures to common space.

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gdevenyi commented Oct 14, 2022

Should we include some kind of handling of label files if provided?

Edit: maybe a seperate label propagation script.

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Resample input subjects into template space.

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gdevenyi commented Nov 25, 2022

  • label files
  • metrics
  • modulate by jacobian (needs DBM outputs)
  • images themselves (needed for QC)

@gdevenyi gdevenyi changed the title Implement Common (reference) space registration/resampling Implement Common (reference) space resampling Jun 13, 2024
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