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adjustments to pypi #815

Merged
merged 1 commit into from
Mar 23, 2024
Merged

adjustments to pypi #815

merged 1 commit into from
Mar 23, 2024

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mrT23
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@mrT23 mrT23 commented Mar 23, 2024

Type

enhancement


Description

  • Introduced a new run_command function in cli.py for streamlined command execution.
  • Refactored cli_pip.py to utilize the new run_command function, removing redundant code.
  • Updated documentation in locally.md to reflect the new command execution process.
  • Updated the project version to 0.2.1 in pyproject.toml.

Changes walkthrough

Relevant files
Enhancement
cli.py
Add run_command Function for Command Execution                     

pr_agent/cli.py

  • Introduced a new function run_command to prepare and execute commands.
  • This function parses the command using set_parser and executes it,
    allowing feedback to appear in GitHub PR comments.
  • +7/-0     
    cli_pip.py
    Refactor main Function to Use run_command                               

    pr_agent/cli_pip.py

  • Removed redundant logging setup and command preparation code.
  • Refactored main function to use the new run_command function from
    cli.py for executing commands.
  • +1/-8     
    Documentation
    locally.md
    Update Documentation for Command Execution                             

    docs/docs/installation/locally.md

  • Updated documentation to reflect changes in command execution process.
  • Replaced detailed command preparation steps with a simplified call to
    run_command.
  • +1/-5     
    Configuration changes
    pyproject.toml
    Bump Project Version to 0.2.1                                                       

    pyproject.toml

    • Updated the project version from 0.2.0 to 0.2.1.
    +1/-1     

    PR-Agent usage:
    Comment /help on the PR to get a list of all available PR-Agent tools and their descriptions

    @codiumai-pr-agent-pro codiumai-pr-agent-pro bot added the enhancement New feature or request label Mar 23, 2024
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    PR Description updated to latest commit (ee4798a)

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    codiumai-pr-agent-pro bot commented Mar 23, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Maintainability
    Improve variable naming for clarity.

    Consider using a more descriptive variable name than run_command for the command string,
    to avoid confusion with the function name run_command. This will improve code readability
    and maintainability.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +command_str = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Enhancement
    Add error handling for argument parsing.

    To ensure that the run_command function can handle cases where parse_args might fail due
    to invalid arguments, consider wrapping the parse_args call in a try-except block. This
    will allow for graceful error handling and user feedback.

    pr_agent/cli.py [56]

    -args = set_parser().parse_args(run_command.split())
    +try:
    +    args = set_parser().parse_args(run_command.split())
    +except Exception as e:
    +    print(f"Error parsing arguments: {e}")
    +    return
     
    Enhance function flexibility with additional arguments.

    To improve the flexibility and reusability of the run_command function, consider allowing
    it to accept additional optional arguments or keyword arguments. This can make the
    function more adaptable to future changes or use cases.

    pr_agent/cli.py [53]

    -def run_command(pr_url, command):
    +def run_command(pr_url, command, **kwargs):
     
    Best practice
    Ensure logging is properly initialized.

    Since the logger setup code was removed, ensure that logging is initialized elsewhere in
    the application. Proper logging is crucial for debugging and monitoring the application's
    behavior.

    pr_agent/cli_pip.py [1]

    -from pr_agent import cli
    +# Ensure logging is initialized in the application startup or main entry point
     
    Follow semantic versioning for version numbers.

    Consider using semantic versioning to manage version numbers systematically. If the
    changes introduced are backward compatible bug fixes, update the patch version. For new
    backward-compatible features, increment the minor version. For breaking changes, increment
    the major version.

    pyproject.toml [7]

    -version = "0.2.1"
    +version = "0.2.1" # Ensure this version change follows semantic versioning principles
     

    ✨ Improve tool usage guide:

    Overview:
    The improve tool scans the PR code changes, and automatically generates suggestions for improving the PR code. The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on a PR.
    When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:

    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    

    With a configuration file, use the following template:

    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    
    Enabling\disabling automation

    When you first install the app, the default mode for the improve tool is:

    pr_commands = ["/improve --pr_code_suggestions.summarize=true", ...]
    

    meaning the improve tool will run automatically on every PR, with summarization enabled. Delete this line to disable the tool from running automatically.

    Utilizing extra instructions

    Extra instructions are very important for the improve tool, since they enable to guide the model to suggestions that are more relevant to the specific needs of the project.

    Be specific, clear, and concise in the instructions. With extra instructions, you are the prompter. Specify relevant aspects that you want the model to focus on.

    Examples for extra instructions:

    [pr_code_suggestions] # /improve #
    extra_instructions="""
    Emphasize the following aspects:
    - Does the code logic cover relevant edge cases?
    - Is the code logic clear and easy to understand?
    - Is the code logic efficient?
    ...
    """
    

    Use triple quotes to write multi-line instructions. Use bullet points to make the instructions more readable.

    A note on code suggestions quality
    • While the current AI for code is getting better and better (GPT-4), it's not flawless. Not all the suggestions will be perfect, and a user should not accept all of them automatically.
    • Suggestions are not meant to be simplistic. Instead, they aim to give deep feedback and raise questions, ideas and thoughts to the user, who can then use his judgment, experience, and understanding of the code base.
    • Recommended to use the 'extra_instructions' field to guide the model to suggestions that are more relevant to the specific needs of the project, or use the custom suggestions 💎 tool
    • With large PRs, best quality will be obtained by using 'improve --extended' mode.
    More PR-Agent commands

    To invoke the PR-Agent, add a comment using one of the following commands:

    • /review: Request a review of your Pull Request.
    • /describe: Update the PR title and description based on the contents of the PR.
    • /improve [--extended]: Suggest code improvements. Extended mode provides a higher quality feedback.
    • /ask <QUESTION>: Ask a question about the PR.
    • /update_changelog: Update the changelog based on the PR's contents.
    • /add_docs 💎: Generate docstring for new components introduced in the PR.
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    See the tools guide for more details.
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    See the improve usage page for a more comprehensive guide on using this tool.

    @mrT23 mrT23 merged commit 1701eb5 into main Mar 23, 2024
    1 check passed
    @mrT23 mrT23 deleted the tr/pypi branch March 23, 2024 14:20
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    mrT23 commented Mar 25, 2024

    Persistent review updated to latest commit ee4798a

    1 similar comment
    @mrT23
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    mrT23 commented Mar 25, 2024

    Persistent review updated to latest commit ee4798a

    @mrT23
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    mrT23 commented Mar 25, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Best practice
    Avoid shadowing built-in or commonly used names with local variables.

    It's recommended to avoid shadowing built-in or commonly used names with local variables.
    In this case, run_command is both a function name and a local variable name within the
    same function, which can lead to confusion and maintenance issues. Consider renaming the
    local variable to something more specific to its use, such as command_to_run.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +command_to_run = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Construct command line arguments list safely to handle spaces and special characters.

    The run_command function uses string manipulation to prepend --pr_url argument, which may
    lead to issues if command contains spaces or special characters. It's safer to construct
    the arguments list in a way that avoids potential issues with spaces or special characters
    in command line arguments.

    pr_agent/cli.py [55-56]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +args_list = ['--pr_url', pr_url] + command.lstrip('/').split()
    +args = set_parser().parse_args(args_list)
     
    Verify and update project dependencies as needed when changing the version.

    When updating the version number in pyproject.toml, it's a good practice to also update
    any dependency versions if needed and verify that the project's dependencies are still
    compatible. This helps in maintaining the project's health and ensures compatibility.

    pyproject.toml [7]

     version = "0.2.1"
    +# Ensure dependencies are up to date and compatible
     
    Security
    Validate or sanitize command line arguments to prevent potential security risks.

    The run_command function directly parses command line arguments using
    set_parser().parse_args(), which might not be safe or intended for all types of input.
    Consider validating or sanitizing the command parameter before constructing the command
    string and parsing it as arguments to prevent potential security risks or unexpected
    behavior.

    pr_agent/cli.py [55-56]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    -args = set_parser().parse_args(run_command.split())
    +command_to_run = f"--pr_url={pr_url} {command.lstrip('/')}"
    +# Validate or sanitize command here
    +args = set_parser().parse_args(command_to_run.split())
     
    Maintainability
    Ensure logging is configured to maintain application observability.

    Removing the logger setup from the main script might impact the visibility of runtime
    issues or debug information. Consider re-adding the logger setup or ensuring that logging
    is configured elsewhere in the application to maintain observability.

    pr_agent/cli_pip.py [1-2]

     from pr_agent import cli
     from pr_agent.config_loader import get_settings
    +from pr_agent.log import setup_logger
    +setup_logger()
     

    ✨ Improve tool usage guide:

    Overview:
    The improve tool scans the PR code changes, and automatically generates suggestions for improving the PR code. The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on a PR.

    • When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:
    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    
    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    

    See the improve usage page for a more comprehensive guide on using this tool.

    @mrT23
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    mrT23 commented Mar 25, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Best practice
    Avoid shadowing names of imported modules or built-in functions by renaming the local variable.

    It's not recommended to use variable names that shadow names of imported modules or
    built-in functions. In this case, run_command is both the name of the function and a local
    variable within it. This can lead to confusion and bugs. Consider renaming the local
    variable to something more descriptive and less likely to cause conflict, such as
    formatted_command.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +formatted_command = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Update the changelog or release notes alongside the version bump.

    When updating the version of a package, it's a good practice to also update the
    CHANGELOG.md file (or another form of release notes) to document the changes made in this
    version. This helps users and contributors understand what has changed and whether they
    need to update or can expect any new features or bug fixes.

    pyproject.toml [7]

    +# Ensure to update the CHANGELOG.md or equivalent with the details of this version update.
     version = "0.2.1"
     
    Enhancement
    Improve the safety and robustness of argument parsing by avoiding string construction.

    The run_command function directly parses command line arguments from a string, which might
    not be safe or robust, especially if command contains spaces or special characters. It's
    better to use a more structured way to pass arguments, such as passing a list of arguments
    directly to parse_args without constructing a string.

    pr_agent/cli.py [55-56]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    -args = set_parser().parse_args(run_command.split())
    +args_list = ['--pr_url', pr_url] + command.lstrip('/').split(' ')
    +args = set_parser().parse_args(args_list)
     
    Add error handling to manage potential issues during command execution gracefully.

    The run_command function does not handle exceptions that may occur during the execution of
    the command. It's a good practice to include error handling to manage any potential issues
    gracefully. Consider wrapping the command execution in a try-except block and logging or
    handling the error appropriately.

    pr_agent/cli.py [59]

    -run(args=args)
    +try:
    +    run(args=args)
    +except Exception as e:
    +    # Handle or log the error as appropriate
    +    print(f"Error executing command: {e}")
     
    Possible issue
    Ensure proper logging setup by reconsidering the removal of setup_logger.

    The removal of setup_logger from the import and its invocation might lead to a lack of
    logging setup, which is crucial for debugging and monitoring the application. If the
    logger setup was intentionally removed, ensure that there's an alternative logging setup.
    If it was removed by mistake, consider adding it back to ensure proper logging.

    pr_agent/cli_pip.py [1-2]

     from pr_agent import cli
     from pr_agent.config_loader import get_settings
    +from pr_agent.log import setup_logger
    +setup_logger()
     

    ✨ Improve tool usage guide:

    Overview:
    The improve tool scans the PR code changes, and automatically generates suggestions for improving the PR code. The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on a PR.

    • When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:
    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    
    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    

    See the improve usage page for a comprehensive guide on using this tool.

    @Codium-ai Codium-ai deleted a comment from codiumai-pr-agent-pro bot Mar 27, 2024
    @mrT23
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    mrT23 commented Mar 27, 2024

    PR Review

    ⏱️ Estimated effort to review [1-5]

    2, because the changes are straightforward and primarily involve refactoring and version bumping. The logic is not complex, but careful attention should be paid to the refactoring to ensure it doesn't introduce any functional regressions.

    🧪 Relevant tests

    No

    🔍 Possible issues

    Possible Bug: The run_command function in cli.py directly parses and executes commands without any validation or error handling. This could lead to unexpected behavior or security issues if the input is not properly sanitized or validated.

    🔒 Security concerns

    No

    Code feedback:
    relevant filepr_agent/cli.py
    suggestion      

    Consider adding input validation or sanitization in the run_command function to ensure that only expected and safe command patterns are executed. This can help prevent potential security issues or unexpected behavior. [important]

    relevant linerun_command = f"--pr_url={pr_url} {command.lstrip('/')}"

    relevant filepr_agent/cli.py
    suggestion      

    It's recommended to handle potential exceptions that may arise from run(args=args) to ensure the application can gracefully handle errors and provide meaningful feedback to the user. [important]

    relevant linerun(args=args)

    relevant filepr_agent/cli_pip.py
    suggestion      

    Since setup_logger() was removed from cli_pip.py, ensure that logging is initialized elsewhere in the application or in the run_command function to maintain logging capabilities. [medium]

    relevant line-setup_logger()

    relevant filepyproject.toml
    suggestion      

    After updating the version to 0.2.1, ensure that any dependencies that might have been affected by the changes in this PR are also reviewed and updated if necessary. [medium]

    relevant lineversion = "0.2.1"


    ✨ Review tool usage guide:

    Overview:
    The review tool scans the PR code changes, and generates a PR review which includes several types of feedbacks, such as possible PR issues, security threats and relevant test in the PR. More feedbacks can be added by configuring the tool.

    The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on any PR.

    • When commenting, to edit configurations related to the review tool (pr_reviewer section), use the following template:
    /review --pr_reviewer.some_config1=... --pr_reviewer.some_config2=...
    
    [pr_reviewer]
    some_config1=...
    some_config2=...
    

    See the review usage page for a comprehensive guide on using this tool.

    @mrT23
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    mrT23 commented Mar 27, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Maintainability
    Rename the variable to avoid naming conflict and improve readability.

    Consider using a more descriptive variable name for run_command inside the run_command
    function to avoid confusion with the function name itself. This can improve code
    readability and maintainability.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +command_str = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Possible issue
    Ensure the run function is properly imported to avoid runtime errors.

    Ensure that the run function called in run_command is properly imported or defined within
    the same module or an imported module to avoid runtime errors.

    pr_agent/cli.py [59]

    -run(args=args)
    +from .module_where_run_is_defined import run
     
    Enhancement
    Ensure logging is configured elsewhere or reintroduce logging configuration.

    Since setup_logger is removed, ensure that logging is configured elsewhere in your
    application or reintroduce logging configuration to maintain logging functionality.

    pr_agent/cli_pip.py [1]

     from pr_agent import cli
    +from pr_agent.log import setup_logger
    +setup_logger()
     
    Add a project description for clarity and context.

    Consider adding a description field under the [project] section to provide a brief
    overview of the project. This can help users and contributors understand the purpose and
    scope of the project at a glance.

    pyproject.toml [7]

     version = "0.2.1"
    +description = "A brief overview of the project."
     
    Best practice
    Add exception handling for robustness and user-friendly error feedback.

    Consider handling potential exceptions that may arise from parse_args or run to ensure the
    application fails gracefully and provides useful feedback to the user.

    pr_agent/cli.py [56-59]

    -args = set_parser().parse_args(run_command.split())
    -run(args=args)
    +try:
    +    args = set_parser().parse_args(run_command.split())
    +    run(args=args)
    +except Exception as e:
    +    print(f"Error executing command: {e}")
     

    ✨ Improve tool usage guide:

    Overview:
    The improve tool scans the PR code changes, and automatically generates suggestions for improving the PR code. The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on a PR.

    • When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:
    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    
    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    

    See the improve usage page for a comprehensive guide on using this tool.

    @mrT23
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    mrT23 commented Mar 27, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Maintainability
    Rename the variable to avoid shadowing the function name.

    The run_command variable is being redefined as a string which could lead to confusion and
    bugs. Consider renaming the variable used to construct the command string to avoid
    shadowing the run_command function name.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +command_str = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Best practice
    Add error handling for argument parsing.

    It's recommended to handle potential exceptions that could be raised by parse_args method,
    especially when dealing with dynamic command strings. Consider wrapping the parse_args
    call in a try-except block to catch and handle argparse.ArgumentError.

    pr_agent/cli.py [56]

    -args = set_parser().parse_args(run_command.split())
    +try:
    +    args = set_parser().parse_args(run_command.split())
    +except argparse.ArgumentError as e:
    +    # Handle or log the error appropriately
    +    print(f"Error parsing arguments: {e}")
     
    Update documentation and references for the new version.

    When updating the version number, it's a good practice to also update the documentation
    and any references to the version number in the codebase to ensure consistency.

    pyproject.toml [7]

     version = "0.2.1"
    +# Ensure all references to the version in the codebase and documentation are updated accordingly.
     
    Possible issue
    Ensure logging is properly configured.

    Removing the logger setup from the main script could lead to missing log configurations
    and unexpected behavior. Ensure that logging is appropriately configured either in this
    script or before this script is executed.

    pr_agent/cli_pip.py [1]

     from pr_agent import cli
    +# Ensure logging is set up here or before this point
     
    Enhancement
    Add logging for command execution feedback.

    Consider adding logging or print statements within the run_command function to provide
    feedback about the command execution status, especially useful for debugging purposes.

    pr_agent/cli.py [59]

    +print(f"Executing command: {command_str}")
     run(args=args)
     

    ✨ Improve tool usage guide:

    Overview:
    The improve tool scans the PR code changes, and automatically generates suggestions for improving the PR code. The tool can be triggered automatically every time a new PR is opened, or can be invoked manually by commenting on a PR.

    • When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:
    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    
    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    

    See the improve usage page for a comprehensive guide on using this tool.

    @mrT23
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    mrT23 commented Mar 27, 2024

    PR Code Suggestions

    CategorySuggestions                                                                                                                                                       
    Best practice
    Avoid shadowing function names with local variable names.

    It's not recommended to use variable names that shadow names of imported modules or
    built-in functions. In this case, run_command is both the name of the function and a local
    variable within it. This can lead to confusion and bugs. Consider renaming the local
    variable to something more descriptive and less likely to cause conflict.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +command_args = f"--pr_url={pr_url} {command.lstrip('/')}"
     
    Update documentation and codebase references to match the new version number.

    When updating the version number of a project, it's a good practice to also update the
    documentation and any references to the version number in the codebase to reflect the new
    version. This helps in maintaining consistency across the project and aids in the tracking
    of different versions.

    pyproject.toml [7]

    -version = "0.2.1"
    +# Ensure all references to the version number in the documentation and codebase are updated to "0.2.1"
     
    Security
    Validate or sanitize external inputs to avoid security vulnerabilities.

    The run_command function directly parses command line arguments using
    set_parser().parse_args() which might not be flexible or safe for all inputs, especially
    if command can come from untrusted sources. Consider validating or sanitizing command
    before constructing run_command.

    pr_agent/cli.py [55]

    -run_command = f"--pr_url={pr_url} {command.lstrip('/')}"
    +# Ensure command is sanitized or validated here
    +sanitized_command = sanitize_command(command)
    +run_command = f"--pr_url={pr_url} {sanitized_command.lstrip('/')}"
     
    Maintainability
    Ensure effective logging or monitoring mechanisms are in place.

    Removing the logger setup from the main script might impact the visibility and debugging
    capabilities of your application. If logging was intentionally removed, consider
    implementing an alternative logging or monitoring mechanism to ensure you can effectively
    troubleshoot and monitor the application's behavior.

    pr_agent/cli_pip.py [1-5]

    -# Removed logger setup code
    +# Consider re-adding logger setup or an alternative monitoring mechanism here
    +setup_logger()
     
    Enhancement
    Add error handling to improve robustness and user feedback.

    The run_command function lacks error handling. Consider adding try-except blocks around
    critical operations like parsing arguments and running commands to gracefully handle
    potential errors and provide meaningful feedback to the user.

    pr_agent/cli.py [56-59]

    -args = set_parser().parse_args(run_command.split())
    -run(args=args)
    +try:
    +    args = set_parser().parse_args(run_command.split())
    +    run(args=args)
    +except Exception as e:
    +    # Handle or log the exception appropriately
    +    print(f"Error executing command: {e}")
     

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    • When commenting, to edit configurations related to the improve tool (pr_code_suggestions section), use the following template:
    /improve --pr_code_suggestions.some_config1=... --pr_code_suggestions.some_config2=...
    
    [pr_code_suggestions]
    some_config1=...
    some_config2=...
    

    See the improve usage page for a comprehensive guide on using this tool.

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    @barnett-yuxiang barnett-yuxiang left a comment

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    cool

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