Code

Reformat the CNODE structure#47

Code

Merged

luisaforozco merged 89 commits intomainDEEPDIP-project/CoupledNODE.jl:mainfrom devDEEPDIP-project/CoupledNODE.jl:devCopy head branch name to clipboardOct 1, 2024

+1,830-18,681

Commits

Commits on Jun 7, 2024

• Refactor grid

  SCiarella

  committed
  01afd0b

• Use view reshape

  SCiarella

  committed
  fc89faa

Commits on Jun 10, 2024

• Pass sol to grid

  SCiarella

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  41180ac

• Update data structure

  SCiarella

  committed
  5c031ee

Commits on Jun 13, 2024

• Fix implementation

  SCiarella

  committed
  bda7acd

• Merge pull request #39 from DEEPDIP-project/reshape_view

  Show description for 29c279e
  SCiarella

  authored
  29c279e

• Merge pull request #38 from DEEPDIP-project/remove_reshape

  Show description for d4f9fd3
  SCiarella

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  d4f9fd3

• Improve Laplacian

  SCiarella

  committed
  802382f

• Merge pull request #40 from DEEPDIP-project/derivatives

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  SCiarella

  authored
  bf41a11

Commits on Jun 14, 2024

• gpu

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  committed
  6106230

• Attempt gpu

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  committed
  580a8ac

• attemp improvement

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  1026ab0

Commits on Jun 16, 2024

• add new implementations

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  committed
  02659cb

Commits on Jun 17, 2024

• Add new methods and clean

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  committed
  1a743f7

• Add test results

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  fc73787

• Start fixing Burgers

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  81a7d04

• Improve GPU part

  luisaforozco

  committed
  0e9cb49

Commits on Jun 19, 2024

• Add gpu vs cpu results comparison

  luisaforozco

  committed
  9ab56d2

• Fix gpu for Lux methods

  luisaforozco

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  5e276e5

Commits on Jun 21, 2024

• Hit mutability wall

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  b6f5b16

Commits on Jun 24, 2024

• fix burger

  SCiarella

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  471104c

• Merge pull request #42 from DEEPDIP-project/only-grid-view

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  SCiarella

  authored
  55eea4a

Commits on Jun 25, 2024

• Create simulation structure for Burgers_1D

  luisaforozco

  committed
  c7cb07d

• Add NS simulations

  SCiarella

  committed
  bbe3020

Commits on Jun 26, 2024

• fix NS

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  committed
  acb6618

Commits on Jun 28, 2024

• Optimize NS rhs, finalize get_data

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  committed
  27c633c

• Create train.jl for 2d NS

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  44f9c73

Commits on Jul 8, 2024

• Add NS

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  704d177

• Add NS

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  7cb79bb

Commits on Jul 9, 2024

• Implement training for NS

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  574f16f

Commits on Jul 15, 2024

• Test INS

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  committed
  f2ec023

Commits on Jul 16, 2024

• Update NS test

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  41a7167

• Implement inplace thing

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  a4b2e50

• Rename NS solvers

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  e5ff23b

• Notebook NS_solvers.jl

  luisaforozco

  committed
  b231cf9

Commits on Jul 18, 2024

• Improve visualization NS_solvers

  luisaforozco

  committed
  a2aee13

Commits on Jul 23, 2024

• Merge branch 'dev' into force_stencil

  luisaforozco

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  6d35980

• Force stencil (#41)

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  SCiarella

  and

  luisaforozco

  authored
  490cc62

• Add Enzyme test

  SCiarella

  committed
  17c1786

• Add further comparisons between the solvers (error histograms) notebook not updated because too large.

  luisaforozco

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  bc0e7a2

• Add divergence calculation and comparison

  luisaforozco

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  c4a2e60

Commits on Jul 24, 2024

• Add comparison of u in time, ammend time measurement of INS to not incliude animations

  luisaforozco

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  84c9140

• Add notebook updated

  luisaforozco

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  67e472a

Commits on Jul 25, 2024

• Add new unconstructed way of creating forces

  luisaforozco

  committed
  4ca14b8

Commits on Jul 26, 2024

• Fix Enzyme

  SCiarella

  committed
  a5249ea

• Add testing of 1 time step and conclusions

  luisaforozco

  committed
  6488844

• Merge remote-tracking branch 'origin/simulations' into simulations

  luisaforozco

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  420822d

• Test SimpleChain vs Lux

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  60365d1

• Merge branch 'simulations' of github.com:DEEPDIP-project/CoupledNODE.jl into simulations

  SCiarella

  committed
  a1a9575

• Merge pull request #44 from DEEPDIP-project/force_stencil

  Show description for a70896c
  SCiarella

  authored
  a70896c

• update

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  committed
  a1c35cd

• Fully differentiate INS using Enzyme

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  committed
  c46d375

Commits on Jul 30, 2024

• Update NS_closure

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  2239f07

• Update NS_closure

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  committed
  6e8dbeb

Commits on Jul 31, 2024

• Implement Enzyme autodiff for INS

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  committed
  d01962e

Commits on Aug 1, 2024

• Speed up Enzyme compilation

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  committed
  7381961

Commits on Aug 2, 2024

• Speed up Enzyme autodiff for INS

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  committed
  57b7751

Commits on Aug 7, 2024

• Speed up Enzyme autodiff for INS

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  4846c63

Commits on Aug 8, 2024

• Cleanup

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  e0b2e7d

• cleanup

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  committed
  5e20343

Commits on Aug 9, 2024

• Make autodiff_bench a notebook

  luisaforozco

  committed
  e0d04d3

• update Project.toml

  SCiarella

  committed
  e19b92a

• Fix Enzyme version in Project

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  committed
  084e1c5

Commits on Aug 23, 2024

• Merge branch 'simulations' into dev

  luisaforozco

  committed
  6356366

• Clean plot directories

  luisaforozco

  committed
  fa9aaa0

Commits on Sep 26, 2024

• Proposal SciML+NeuralClosure (#54)

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  luisaforozco

  authored
  93b0a53

Commits on Sep 27, 2024

• Removes examples (outdated now)

  luisaforozco

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  894e530

• remove unused files in src

  luisaforozco

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  4bbd36b

• Delete test (that were pointing to examples.

  luisaforozco

  committed
  df905a9

• Delete some unused files in simulations/NavierStokes2D

  luisaforozco

  committed
  6bbd5ae

• Ammend NS_closure and NS_solvers scripts

  luisaforozco

  committed
  59d4858

• Clean up dependencies clutter

  luisaforozco

  committed
  698197a

• Remove get_data script might be ok for spectral but for now, we do not need it

  luisaforozco

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  6e46f50

• Fix import statement

  luisaforozco

  committed
  6885ef0

• Clean further dependencies

  luisaforozco

  committed
  75a0e01

Commits on Oct 1, 2024

• Merge pull request #57 from DEEPDIP-project/luisaforozco/cleanup

  Show description for b9c33a7
  SCiarella

  authored
  b9c33a7

• fix a posteriori

  SCiarella

  committed
  3ff5936

• Create helper_scripts and adapt pre-commit to it

  luisaforozco

  committed
  226d981

• Amend CONTRIBUTING instructions for developers

  luisaforozco

  committed
  bb61776

• Merge pull request #59 from DEEPDIP-project/luisaforozco/cleanup

  Show description for a921ea3
  SCiarella

  authored
  a921ea3

• Remove Burgers and KdV things

  luisaforozco

  committed
  57bacfd

• fix rhs

  SCiarella

  committed
  098ee55

• Remove neural closure dependency for dataloader and io_arrays creation

  luisaforozco

  committed
  5177b89

• Fix summation in rhs

  v1kko

  committed
  0e72f79

• remove NeuralClosure dependency. Add JLD2 and comment code to generate the data. Now, you can load the data via JLD2 and contnue from there.

  luisaforozco

  committed
  7b3f2de

• Merge pull request #60 from DEEPDIP-project/luisaforozco/cleanup_NS

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  SCiarella

  authored
  900eb68

• Put general params outside of commented block for data generation

  luisaforozco

  committed
  79e22f7

• replace griddims by axes(), which are supported by Zygote

  v1kko

  committed
  c9d6a30

• Merge pull request #58 from DEEPDIP-project/fix_aposteriori

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  SCiarella

  authored
  8838928