Fix seg fault and enable parameter error=0 in FrechetShortcut #196
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| name: Processing commands | |
| on: | |
| issue_comment: | |
| types: [created] | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| jobs: | |
| build: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| pull-requests: write # to create comment | |
| runs-on: ubuntu-latest | |
| if: ${{ github.event.issue.pull_request }} | |
| steps: | |
| - uses: actions/github-script@v6 | |
| id: get_round | |
| with: | |
| result-encoding: string | |
| script: | | |
| const bodycmt = context.payload.comment.body | |
| if(bodycmt.includes("/echo")) | |
| return 'echo' | |
| if(bodycmt.includes("/builddoc")) | |
| return 'builddoc' | |
| if(bodycmt.includes("/fullbuild")) | |
| return 'fullbuild' | |
| return 'stop' | |
| - name: Emoji-comment | |
| if: steps.get_round.outputs.result != 'stop' | |
| uses: actions/github-script@v6 | |
| with: | |
| github-token: ${{secrets.GITHUB_TOKEN}} | |
| script: | | |
| github.rest.reactions.createForIssueComment({ | |
| comment_id: ${{ github.event.comment.id }}, | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| content: 'rocket'}) | |
| ### Common | |
| - uses: actions/github-script@v6 | |
| id: get_pr_number | |
| with: | |
| result-encoding: string | |
| script: | | |
| //get pullrequest url | |
| const pr_number = context.payload.issue.number | |
| return pr_number | |
| ###### | |
| # buildDoc COMMAND | |
| - uses: actions/checkout@v3 | |
| name: "checkout branch" | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| with: | |
| repository: ${{ github.repository }} | |
| ref: refs/pull/${{ steps.get_pr_number.outputs.result }}/merge | |
| # token: ${{ secrets.PUSH_TO_DGTAL_GITHUB_IO_TOKEN }} | |
| fetch-depth: 2 | |
| - name: install dependencies | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| run: | | |
| set -x | |
| sudo apt-get update && sudo apt-get install -y graphviz ssh doxygen libboost-dev texlive-latex-base | |
| git config --global user.email "dgtal@dgtal.org" | |
| git config --global user.name "DGtal" | |
| - name: configure all | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| run: | | |
| set -ex | |
| mkdir -p build_doc && cd build_doc && cmake .. -DBUILD_EXAMPLES=true -DBUILD_TESTING=true | |
| - name: build doc | |
| id: build-and-check-doc | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| run: | | |
| cd build_doc | |
| wget --no-check-certificate -O "${{runner.workspace}}/DGtal/build_doc/DGtalTools-tagfile" http://dgtal.org/doc/tags/DGtalTools-tagfile; | |
| make -j 2 doc > buildDoc.log | |
| export BUILD_DIR=${{runner.workspace}}/DGtal/build_doc | |
| export SRC_DIR=${{runner.workspace}}/DGtal/ | |
| ${{runner.workspace}}/DGtal/.github/workflows/checkDoxygenDocumentation.sh | |
| if [ -s /tmp/doxygen.kept.log ]; then | |
| echo "********************************************" | |
| content=`cat /tmp/doxygen.kept.log` | |
| echo $content | |
| delimiter="$(openssl rand -hex 8)" | |
| echo "DoxygenError<<${delimiter}" >> "${GITHUB_OUTPUT}" | |
| cat /tmp/doxygen.kept.log >> "${GITHUB_OUTPUT}" | |
| echo "${delimiter}" >> "${GITHUB_OUTPUT}" | |
| exit 1 | |
| fi | |
| - name: Preparing Deploy | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| run: | | |
| mkdir pr${{ steps.get_pr_number.outputs.result }} | |
| mv ${{runner.workspace}}/DGtal/build_doc/html/* pr${{ steps.get_pr_number.outputs.result }}/ | |
| git clone --depth 2 https://github.com/DGtal-team/doc-pr.git | |
| cd doc-pr | |
| rm -rf pr${{ steps.get_pr_number.outputs.result }} | |
| mv ../pr${{ steps.get_pr_number.outputs.result }} . | |
| - name: Deploy to GitHub Pages | |
| if: steps.get_round.outputs.result == 'builddoc' | |
| uses: JamesIves/github-pages-deploy-action@v4.4.1 | |
| with: | |
| token: ${{ secrets.DEPLOYACTION }} | |
| repository-name: DGtal-team/doc-pr | |
| folder: doc-pr | |
| branch: main | |
| single-commit: true | |
| clean: true | |
| - name: Post address | |
| uses: actions/github-script@v6 | |
| if: ${{ steps.get_round.outputs.result == 'builddoc' && success() && steps.get_round.outputs.result != 'stop' }} | |
| with: | |
| script: | | |
| const tmp_round = "${{ steps.get_round.outputs.result }}"; | |
| const id = tmp_round.indexOf(":"); | |
| const round = tmp_round.substring(0,id); | |
| const address = "The documentation is built. It will be available, after a few minutes, here: https://dgtal-team.github.io/doc-pr/pr${{ steps.get_pr_number.outputs.result }}/index.html" | |
| github.rest.issues.createComment({ | |
| owner: "DGtal-team", | |
| repo: "DGtal", | |
| issue_number: ${{ github.event.issue.number }}, | |
| body: address | |
| }); | |
| github.rest.reactions.createForIssueComment({ | |
| comment_id: ${{ github.event.comment.id }}, | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| content: 'hooray'}) | |
| - name: Post error | |
| env: | |
| ERRORMSG: ${{steps.build-and-check-doc.outputs.DoxygenError}} | |
| uses: actions/github-script@v6 | |
| if: ${{ failure() && steps.get_round.outputs.result == 'builddoc' }} | |
| with: | |
| script: | | |
| const error = process.env.ERRORMSG | |
| const msg = "There was an error while building the doc. Check the GitHub actions for debugging.\n"+error | |
| github.rest.issues.createComment({ | |
| owner: "DGtal-team", | |
| repo: "DGtal", | |
| issue_number: ${{ github.event.issue.number }}, | |
| body: msg | |
| }); | |
| # ECHO COMMAND | |
| - name: Echo action | |
| uses: actions/github-script@v6 | |
| if: steps.get_round.outputs.result == 'echo' | |
| with: | |
| github-token: ${{secrets.GITHUB_TOKEN}} | |
| script: | | |
| const bodycmt = context.payload.comment.body | |
| github.rest.issues.createComment({ | |
| issue_number: context.issue.number, | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| body: bodycmt | |
| }) | |
| ########### | |
| # fullbuild COMMAND | |
| - name: install dependencies | |
| if: steps.get_round.outputs.result == 'fullbuild' | |
| run: | | |
| set -x | |
| sudo apt-get update && sudo apt-get install -y libqglviewer-dev-qt5 libboost-dev ninja-build libhdf5-serial-dev libboost-dev libcairo2-dev libgmp-dev libfftw3-dev libinsighttoolkit4-dev | |
| git config --global user.email "dgtal@dgtal.org" | |
| git config --global user.name "DGtal" | |
| - uses: actions/checkout@v3 | |
| name: "checkout branch" | |
| if: steps.get_round.outputs.result == 'fullbuild' | |
| with: | |
| repository: ${{ github.repository }} | |
| ref: refs/pull/${{ steps.get_pr_number.outputs.result }}/merge | |
| fetch-depth: 2 | |
| - name: Emoji-comment | |
| if: steps.get_round.outputs.result != 'stop' | |
| uses: actions/github-script@v6 | |
| with: | |
| github-token: ${{secrets.GITHUB_TOKEN}} | |
| script: | | |
| github.rest.reactions.createForIssueComment({ | |
| comment_id: ${{ github.event.comment.id }}, | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| content: 'rocket'}) | |
| - name: configure/build/test fullbuild | |
| if: steps.get_round.outputs.result == 'fullbuild' | |
| run: | | |
| cmake -E make_directory ${{runner.workspace}}/build | |
| cmake -S ${{runner.workspace}}/DGtal -B ${{runner.workspace}}/build -DBUILD_EXAMPLES=true -DBUILD_TESTING=true -DDGTAL_RANDOMIZED_TESTING_THRESHOLD=100 -DWITH_OPENMP=true -DWITH_GMP=true -DWITH_FFTW3=true -DWARNING_AS_ERROR=ON -DWITH_HDF5=true -DWITH_QGLVIEWER=true -DWITH_CAIRO=true -DWITH_EIGEN=true -DWITH_ITK=true -DDGTAL_ENABLE_FLOATING_POINT_EXCEPTIONS=true -G Ninja | |
| cd ${{runner.workspace}}/build | |
| cmake --build . | |
| export TESTBLACKLIST="(testLinearStructure)" | |
| ctest -E $TESTBLACKLIST | |
| ########### |