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linux tests and documentation builds for 'kiara_plugin.network_analysis'

chore: minor #285

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chore: minor

chore: minor #285

Workflow file for this run

.github/workflows/build-linux.yaml at d112ec2
name: "linux tests and documentation builds for 'kiara_plugin.network_analysis'"
# This workflow is triggered on pushes to the repository.
on: [push]
jobs:
# commitlint:
# name: lint commit message
# runs-on: ubuntu-latest
# steps:
# - uses: actions/checkout@v2
# with:
# fetch-depth: 0
# - uses: wagoid/commitlint-github-action@v4
test-linux:
name: pytest on linux
runs-on: ubuntu-latest
strategy:
matrix:
python_version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- name: "Set up Python ${{ matrix.python_version }}"
uses: actions/setup-python@v4
with:
python-version: "${{ matrix.python_version }}"
- uses: actions/checkout@v3
- name: install kiara_plugin.network_analysis
run: pip install -U .[all,dev_testing]
- name: display installed kiara and module package versions
run: pip list | grep kiara
- name: Test with pytest
run: make test
# Uncomment this if you have coveralls.io setup with this repo
# coverage:
# name: create and publish test coverage
# runs-on: ubuntu-latest
# steps:
# - name: "Set up Python 3.9"
# uses: actions/setup-python@v4
# with:
# python-version: "3.9"
# - uses: actions/checkout@v3
# - name: install kiara
# run: pip install -U .[all,dev_testing]
# - name: display installed kiara and module package versions
# run: pip list | grep kiara
# - name: Run coverage
# run: coverage run -m pytest tests
# - name: coveralls
# uses: coverallsapp/github-action@v2
# Uncomment this if you want to run mypy
mypy-linux:
name: mypy check on linux
runs-on: ubuntu-latest
strategy:
matrix:
python_version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- name: "Set up Python ${{ matrix.python_version }}"
uses: actions/setup-python@v4
with:
python-version: "${{ matrix.python_version }}"
- uses: actions/checkout@v3
- name: install kiara_plugin.network_analysis
run: pip install -U .[all,dev_testing]
- name: Test with mypy
run: make mypy
linting-linux:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Install Python
uses: actions/setup-python@v4
with:
python-version: "3.11"
- name: pip cache
id: pip-cache
uses: actions/cache@v3
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/setup.*') }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install -U ruff
# Include `--format=github` to enable automatic inline annotations.
- name: Run Ruff
run: ruff --output-format=github src/
build_python_package:
name: build python package
runs-on: ubuntu-latest
needs:
- test-linux
- mypy-linux
- linting-linux
steps:
- name: Set up Python 3.11
uses: actions/setup-python@v4
with:
python-version: "3.11"
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: install pip
run: pip install -U pip setuptools setuptools_scm build
- name: create packages
run: python -m build
- name: upload artifacts
uses: actions/upload-artifact@v3
with:
name: build-dists
path: dist/
release_python_package:
name: publish python package to pypi
if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags')
runs-on: ubuntu-latest
needs:
- build_python_package
permissions:
id-token: write # IMPORTANT: this permission is mandatory for trusted publishing
steps:
- name: Retrieve build distributions
uses: actions/download-artifact@v3
with:
name: build-dists
path: dist/
- name: publish to PyPI # make sure you have pypi trusted publishing configured for this repo
uses: pypa/gh-action-pypi-publish@release/v1
build_and_release_conda_package:
name: conda package build (and upload if release)
runs-on: ubuntu-latest
needs:
- test-linux
- mypy-linux # uncomment if this step is enabled
- linting-linux # uncomment if this step is enabled
steps:
- name: "Set up Python 3.11"
uses: actions/setup-python@v4
with:
python-version: "3.11"
- name: pip cache
id: pip-cache
uses: actions/cache@v3
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/setup.*') }}
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: install kiara
run: pip install kiara
- name: install required plugin packages
run: pip install git+https://github.com/DHARPA-Project/kiara_plugin.develop.git@develop
- name: build conda package
if: ${{ ( github.ref == 'refs/heads/develop') }}
run: kiara conda build-package --patch-data ci/conda/conda-pkg-patch.yaml .
- name: extract tag name
run: echo "RELEASE_VERSION=${GITHUB_REF#refs/*/}" >> $GITHUB_ENV
- name: build & publish conda package
if: ${{ startsWith(github.ref, 'refs/tags/') }}
run: kiara conda build-package --publish --user dharpa --token ${{ secrets.ANACONDA_PUSH_TOKEN }} --patch-data ci/conda/conda-pkg-patch.yaml .
merge_tag_to_main:
name: merge current tag to main branch
runs-on: ubuntu-latest
if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags')
needs:
- release_python_package
- build_and_release_conda_package
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- run: git config --global user.email "markus@frkl.io"
- run: git config --global user.name "Markus Binsteiner"
- name: extract tag name
run: echo "RELEASE_VERSION=${GITHUB_REF#refs/*/}" >> $GITHUB_ENV
- name: checkout main branch
run: git checkout main
- name: merge tag
run: git merge "${RELEASE_VERSION}"
- name: push updated main branch
run: git push https://${{ secrets.GITHUB_TOKEN }}@github.com/DHARPA-Project/kiara_plugin.network_analysis.git