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Filter out dead threads in runtime metrics #6298

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merged 2 commits into from
Nov 21, 2024
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kevingosse
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@kevingosse kevingosse commented Nov 18, 2024

Summary of changes

Filter out the dead threads in the runtime metrics when using process snapshot.

Reason for change

We originally relied only on the count in the PSS_THREAD_INFORMATION instance returned by PssQuerySnapshot. However, it does not only count threads that are alive, but also dead threads which handle isn't closed (the handle for dead managed threads is closed during finalization after a garbage collection, so they can hang around for a while, especially since threads tend to reach generation 2).

This can be demonstrated by this simple code:

internal class Program
{
    static void Main()
    {
        var threads = new Thread[50];

        for (var i = 0; i < threads.Length; i++)
        {
            threads[i] = new Thread(() => Thread.Sleep(1));
            threads[i].Start();
        }

        Thread.Sleep(1000);

        ProcessSnapshotRuntimeInformation.GetCurrentProcessMetrics(out _, out _, out var threadCount, out _);

        Console.WriteLine($"Thread count: {threadCount}");
    }
}

With the old code, this would display 58, even thought the task manager shows only 8 threads.

Implementation details

We now use PssWalkSnapshot to walk the snapshot and filter out the dead threads. I had to use a custom FILETIME struct to get the alignment correct in both 32/64 bits. In hindsight, this might have worked for PSS_PROCESS_INFORMATION as well (avoiding the need to have separate PSS_PROCESS_INFORMATION_32/PSS_PROCESS_INFORMATION_64), I might try to improve that in a future PR.

Test coverage

The runtime metrics are already covered by tests. We don't test for dead threads, but it seems hard to do in a reliable way (and I think we can all agree our CI is flaky enough at the moment).
Also, the existing test has a tolerance of 500 threads. Back then I couldn't explain why we got so much variation in the results, I guess now we have a reasonable explanation (it was changed in #5329, shortly after adding PSS support).

Because we add additional calls for each thread, it has an impact on performance so I ran some benchmarks.

With 50 threads (realistic):

| Method  | Mean       | Error    | StdDev   | Ratio | RatioSD |
|-------- |-----------:|---------:|---------:|------:|--------:|
| Process | 6,466.2 us | 71.57 us | 63.45 us | 63.15 |    9.80 |
| Old     |   104.9 us |  5.67 us | 16.71 us |  1.02 |    0.23 |
| New     |   127.1 us |  2.48 us |  2.65 us |  1.24 |    0.19 |

With 250 threads (extreme):

| Method  | Mean         | Error      | StdDev     | Ratio  | RatioSD |
|-------- |-------------:|-----------:|-----------:|-------:|--------:|
| Process | 17,621.58 us | 349.413 us | 564.238 us | 183.31 |   20.11 |
| Old     |     97.27 us |   3.801 us |  11.028 us |   1.01 |    0.16 |
| New     |    129.39 us |   2.299 us |   2.823 us |   1.35 |    0.14 |

We're 25 to 35% slower, but we're still orders of magnitude faster than using the .NET Process object.

Other details

Fixes #6172

@kevingosse kevingosse requested a review from a team as a code owner November 18, 2024 14:07
@github-actions github-actions bot added the area:tracer The core tracer library (Datadog.Trace, does not include OpenTracing, native code, or integrations) label Nov 18, 2024
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LGTM 🙈

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datadog-ddstaging bot commented Nov 18, 2024

Datadog Report

Branch report: kevin/pss_dead_threads
Commit report: 1c78cc5
Test service: dd-trace-dotnet

✅ 0 Failed, 455778 Passed, 2751 Skipped, 19h 56m 28.36s Total Time

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andrewlock commented Nov 18, 2024

Execution-Time Benchmarks Report ⏱️

Execution-time results for samples comparing the following branches/commits:

Execution-time benchmarks measure the whole time it takes to execute a program. And are intended to measure the one-off costs. Cases where the execution time results for the PR are worse than latest master results are shown in red. The following thresholds were used for comparing the execution times:

  • Welch test with statistical test for significance of 5%
  • Only results indicating a difference greater than 5% and 5 ms are considered.

Note that these results are based on a single point-in-time result for each branch. For full results, see the dashboard.

Graphs show the p99 interval based on the mean and StdDev of the test run, as well as the mean value of the run (shown as a diamond below the graph).

gantt
    title Execution time (ms) FakeDbCommand (.NET Framework 4.6.2) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (72ms)  : 63, 81
     .   : milestone, 72,
    master - mean (72ms)  : 64, 80
     .   : milestone, 72,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (1,112ms)  : 1091, 1133
     .   : milestone, 1112,
    master - mean (1,107ms)  : 1085, 1128
     .   : milestone, 1107,

Loading
gantt
    title Execution time (ms) FakeDbCommand (.NET Core 3.1) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (109ms)  : 107, 111
     .   : milestone, 109,
    master - mean (108ms)  : 106, 110
     .   : milestone, 108,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (770ms)  : 757, 784
     .   : milestone, 770,
    master - mean (771ms)  : 757, 785
     .   : milestone, 771,

Loading
gantt
    title Execution time (ms) FakeDbCommand (.NET 6) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (93ms)  : 90, 97
     .   : milestone, 93,
    master - mean (92ms)  : 90, 93
     .   : milestone, 92,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (731ms)  : 711, 750
     .   : milestone, 731,
    master - mean (726ms)  : 707, 745
     .   : milestone, 726,

Loading
gantt
    title Execution time (ms) HttpMessageHandler (.NET Framework 4.6.2) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (191ms)  : 185, 197
     .   : milestone, 191,
    master - mean (191ms)  : 186, 195
     .   : milestone, 191,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (1,218ms)  : 1189, 1247
     .   : milestone, 1218,
    master - mean (1,213ms)  : 1190, 1236
     .   : milestone, 1213,

Loading
gantt
    title Execution time (ms) HttpMessageHandler (.NET Core 3.1) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (277ms)  : 272, 282
     .   : milestone, 277,
    master - mean (276ms)  : 271, 281
     .   : milestone, 276,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (949ms)  : 934, 965
     .   : milestone, 949,
    master - mean (948ms)  : 929, 967
     .   : milestone, 948,

Loading
gantt
    title Execution time (ms) HttpMessageHandler (.NET 6) 
    dateFormat  X
    axisFormat %s
    todayMarker off
    section Baseline
    This PR (6298) - mean (267ms)  : 263, 270
     .   : milestone, 267,
    master - mean (265ms)  : 261, 270
     .   : milestone, 265,

    section CallTarget+Inlining+NGEN
    This PR (6298) - mean (932ms)  : 914, 951
     .   : milestone, 932,
    master - mean (931ms)  : 913, 950
     .   : milestone, 931,

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andrewlock commented Nov 18, 2024

Benchmarks Report for tracer 🐌

Benchmarks for #6298 compared to master:

  • 3 benchmarks are faster, with geometric mean 1.179
  • 2 benchmarks are slower, with geometric mean 1.119
  • All benchmarks have the same allocations

The following thresholds were used for comparing the benchmark speeds:

  • Mann–Whitney U test with statistical test for significance of 5%
  • Only results indicating a difference greater than 10% and 0.3 ns are considered.

Allocation changes below 0.5% are ignored.

Benchmark details

Benchmarks.Trace.ActivityBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master StartStopWithChild net6.0 8.01μs 40.6ns 177ns 0.012 0.00399 0 5.61 KB
master StartStopWithChild netcoreapp3.1 10.1μs 52.5ns 241ns 0.0262 0.0157 0.00523 5.8 KB
master StartStopWithChild net472 16.4μs 51.6ns 193ns 1.03 0.301 0.0977 6.21 KB
#6298 StartStopWithChild net6.0 7.96μs 43.8ns 273ns 0.0153 0.00767 0 5.61 KB
#6298 StartStopWithChild netcoreapp3.1 10.1μs 51.6ns 258ns 0.015 0.005 0 5.8 KB
#6298 StartStopWithChild net472 16.2μs 35.9ns 134ns 1.04 0.324 0.0971 6.21 KB
Benchmarks.Trace.AgentWriterBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master WriteAndFlushEnrichedTraces net6.0 501μs 250ns 968ns 0 0 0 2.7 KB
master WriteAndFlushEnrichedTraces netcoreapp3.1 645μs 335ns 1.3μs 0 0 0 2.7 KB
master WriteAndFlushEnrichedTraces net472 873μs 454ns 1.7μs 0.434 0 0 3.3 KB
#6298 WriteAndFlushEnrichedTraces net6.0 482μs 454ns 1.57μs 0 0 0 2.7 KB
#6298 WriteAndFlushEnrichedTraces netcoreapp3.1 653μs 310ns 1.2μs 0 0 0 2.7 KB
#6298 WriteAndFlushEnrichedTraces net472 870μs 639ns 2.3μs 0.434 0 0 3.3 KB
Benchmarks.Trace.AspNetCoreBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master SendRequest net6.0 200μs 1.16μs 9.1μs 0.2 0 0 18.73 KB
master SendRequest netcoreapp3.1 222μs 1.25μs 9.29μs 0.222 0 0 20.89 KB
master SendRequest net472 0ns 0ns 0ns 0 0 0 0 b
#6298 SendRequest net6.0 203μs 1.19μs 10.9μs 0.2 0 0 18.73 KB
#6298 SendRequest netcoreapp3.1 214μs 1.17μs 6.6μs 0.217 0 0 20.89 KB
#6298 SendRequest net472 0.000452ns 0.000228ns 0.000855ns 0 0 0 0 b
Benchmarks.Trace.CIVisibilityProtocolWriterBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master WriteAndFlushEnrichedTraces net6.0 577μs 2.92μs 16.8μs 0.553 0 0 41.76 KB
master WriteAndFlushEnrichedTraces netcoreapp3.1 675μs 3μs 11.6μs 0.336 0 0 41.83 KB
master WriteAndFlushEnrichedTraces net472 868μs 3.23μs 12.5μs 8.3 2.62 0.437 53.28 KB
#6298 WriteAndFlushEnrichedTraces net6.0 585μs 3.21μs 18.7μs 0.548 0 0 41.64 KB
#6298 WriteAndFlushEnrichedTraces netcoreapp3.1 681μs 3.65μs 19.3μs 0.329 0 0 41.8 KB
#6298 WriteAndFlushEnrichedTraces net472 856μs 3.93μs 15.2μs 8.39 2.52 0.419 53.32 KB
Benchmarks.Trace.DbCommandBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master ExecuteNonQuery net6.0 1.33μs 1.03ns 3.84ns 0.014 0 0 1.02 KB
master ExecuteNonQuery netcoreapp3.1 1.77μs 3.27ns 12.7ns 0.0131 0 0 1.02 KB
master ExecuteNonQuery net472 2.09μs 1.04ns 3.75ns 0.156 0.00104 0 987 B
#6298 ExecuteNonQuery net6.0 1.3μs 1.45ns 5.62ns 0.0143 0 0 1.02 KB
#6298 ExecuteNonQuery netcoreapp3.1 1.74μs 1.34ns 5.21ns 0.0138 0 0 1.02 KB
#6298 ExecuteNonQuery net472 2.09μs 2.77ns 10.7ns 0.156 0.00104 0 987 B
Benchmarks.Trace.ElasticsearchBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master CallElasticsearch net6.0 1.28μs 0.482ns 1.87ns 0.0135 0 0 976 B
master CallElasticsearch netcoreapp3.1 1.54μs 1.03ns 3.99ns 0.0129 0 0 976 B
master CallElasticsearch net472 2.51μs 1.16ns 4.5ns 0.157 0 0 995 B
master CallElasticsearchAsync net6.0 1.28μs 0.633ns 2.45ns 0.0135 0 0 952 B
master CallElasticsearchAsync netcoreapp3.1 1.65μs 0.898ns 3.36ns 0.014 0 0 1.02 KB
master CallElasticsearchAsync net472 2.56μs 0.795ns 2.98ns 0.167 0 0 1.05 KB
#6298 CallElasticsearch net6.0 1.21μs 0.626ns 2.26ns 0.0133 0 0 976 B
#6298 CallElasticsearch netcoreapp3.1 1.55μs 0.842ns 3.04ns 0.0132 0 0 976 B
#6298 CallElasticsearch net472 2.65μs 3.07ns 11.9ns 0.157 0 0 995 B
#6298 CallElasticsearchAsync net6.0 1.29μs 1.12ns 4.33ns 0.013 0 0 952 B
#6298 CallElasticsearchAsync netcoreapp3.1 1.7μs 1.09ns 4.06ns 0.0135 0 0 1.02 KB
#6298 CallElasticsearchAsync net472 2.62μs 2.86ns 11.1ns 0.166 0 0 1.05 KB
Benchmarks.Trace.GraphQLBenchmark - Faster 🎉 Same allocations ✔️

Faster 🎉 in #6298

Benchmark base/diff Base Median (ns) Diff Median (ns) Modality
Benchmarks.Trace.GraphQLBenchmark.ExecuteAsync‑net6.0 1.197 1,508.61 1,260.67

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master ExecuteAsync net6.0 1.51μs 0.534ns 2.07ns 0.0134 0 0 952 B
master ExecuteAsync netcoreapp3.1 1.59μs 0.857ns 3.2ns 0.0127 0 0 952 B
master ExecuteAsync net472 1.8μs 0.547ns 2.12ns 0.145 0 0 915 B
#6298 ExecuteAsync net6.0 1.26μs 0.763ns 2.86ns 0.0135 0 0 952 B
#6298 ExecuteAsync netcoreapp3.1 1.61μs 1.21ns 4.68ns 0.0128 0 0 952 B
#6298 ExecuteAsync net472 1.76μs 0.457ns 1.77ns 0.145 0 0 915 B
Benchmarks.Trace.HttpClientBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master SendAsync net6.0 4.3μs 3.14ns 12.2ns 0.0325 0 0 2.31 KB
master SendAsync netcoreapp3.1 5.23μs 5.65ns 21.9ns 0.0368 0 0 2.85 KB
master SendAsync net472 7.23μs 8.75ns 33.9ns 0.494 0 0 3.12 KB
#6298 SendAsync net6.0 4.45μs 1.91ns 7.4ns 0.0312 0 0 2.31 KB
#6298 SendAsync netcoreapp3.1 5.25μs 1.69ns 6.31ns 0.0391 0 0 2.85 KB
#6298 SendAsync net472 7.4μs 1.97ns 7.64ns 0.492 0 0 3.12 KB
Benchmarks.Trace.ILoggerBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master EnrichedLog net6.0 1.58μs 0.613ns 2.3ns 0.0232 0 0 1.64 KB
master EnrichedLog netcoreapp3.1 2.19μs 1.32ns 4.76ns 0.0221 0 0 1.64 KB
master EnrichedLog net472 2.7μs 5.51ns 21.3ns 0.25 0 0 1.57 KB
#6298 EnrichedLog net6.0 1.49μs 1.34ns 5.03ns 0.0228 0 0 1.64 KB
#6298 EnrichedLog netcoreapp3.1 2.28μs 2.46ns 9.22ns 0.0227 0 0 1.64 KB
#6298 EnrichedLog net472 2.56μs 1.57ns 5.88ns 0.249 0 0 1.57 KB
Benchmarks.Trace.Log4netBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master EnrichedLog net6.0 119μs 237ns 918ns 0.06 0 0 4.28 KB
master EnrichedLog netcoreapp3.1 124μs 114ns 443ns 0 0 0 4.28 KB
master EnrichedLog net472 152μs 187ns 725ns 0.687 0.229 0 4.46 KB
#6298 EnrichedLog net6.0 118μs 153ns 594ns 0 0 0 4.28 KB
#6298 EnrichedLog netcoreapp3.1 124μs 117ns 453ns 0 0 0 4.28 KB
#6298 EnrichedLog net472 153μs 123ns 478ns 0.692 0.231 0 4.46 KB
Benchmarks.Trace.NLogBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master EnrichedLog net6.0 3.07μs 2.25ns 8.73ns 0.0306 0 0 2.2 KB
master EnrichedLog netcoreapp3.1 4.01μs 1.44ns 5.57ns 0.03 0 0 2.2 KB
master EnrichedLog net472 4.88μs 5.97ns 23.1ns 0.32 0 0 2.02 KB
#6298 EnrichedLog net6.0 3.05μs 0.932ns 3.61ns 0.0304 0 0 2.2 KB
#6298 EnrichedLog netcoreapp3.1 4.22μs 1.97ns 7.64ns 0.0297 0 0 2.2 KB
#6298 EnrichedLog net472 4.86μs 1.61ns 6.03ns 0.318 0 0 2.02 KB
Benchmarks.Trace.RedisBenchmark - Slower ⚠️ Same allocations ✔️

Slower ⚠️ in #6298

Benchmark diff/base Base Median (ns) Diff Median (ns) Modality
Benchmarks.Trace.RedisBenchmark.SendReceive‑net6.0 1.113 1,316.63 1,464.89

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master SendReceive net6.0 1.32μs 0.646ns 2.5ns 0.0158 0 0 1.14 KB
master SendReceive netcoreapp3.1 1.73μs 1.12ns 4.34ns 0.0148 0 0 1.14 KB
master SendReceive net472 1.99μs 1.25ns 4.84ns 0.183 0 0 1.16 KB
#6298 SendReceive net6.0 1.46μs 0.554ns 2.14ns 0.0161 0 0 1.14 KB
#6298 SendReceive netcoreapp3.1 1.82μs 1.49ns 5.77ns 0.0154 0 0 1.14 KB
#6298 SendReceive net472 2.14μs 0.847ns 3.28ns 0.183 0 0 1.16 KB
Benchmarks.Trace.SerilogBenchmark - Same speed ✔️ Same allocations ✔️

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master EnrichedLog net6.0 2.95μs 0.924ns 3.46ns 0.022 0 0 1.6 KB
master EnrichedLog netcoreapp3.1 3.85μs 2.7ns 10.5ns 0.021 0 0 1.65 KB
master EnrichedLog net472 4.3μs 1.44ns 5.4ns 0.323 0 0 2.04 KB
#6298 EnrichedLog net6.0 2.78μs 2.15ns 8.32ns 0.0222 0 0 1.6 KB
#6298 EnrichedLog netcoreapp3.1 3.96μs 1.04ns 3.88ns 0.0216 0 0 1.65 KB
#6298 EnrichedLog net472 4.51μs 4.51ns 17.5ns 0.322 0 0 2.04 KB
Benchmarks.Trace.SpanBenchmark - Slower ⚠️ Same allocations ✔️

Slower ⚠️ in #6298

Benchmark diff/base Base Median (ns) Diff Median (ns) Modality
Benchmarks.Trace.SpanBenchmark.StartFinishSpan‑netcoreapp3.1 1.125 551.54 620.45

Faster 🎉 in #6298

Benchmark base/diff Base Median (ns) Diff Median (ns) Modality
Benchmarks.Trace.SpanBenchmark.StartFinishSpan‑net6.0 1.215 493.56 406.34

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master StartFinishSpan net6.0 493ns 0.527ns 2.04ns 0.00801 0 0 576 B
master StartFinishSpan netcoreapp3.1 552ns 0.94ns 3.64ns 0.00779 0 0 576 B
master StartFinishSpan net472 636ns 1.38ns 5.33ns 0.0917 0 0 578 B
master StartFinishScope net6.0 488ns 0.365ns 1.42ns 0.00966 0 0 696 B
master StartFinishScope netcoreapp3.1 671ns 0.68ns 2.63ns 0.00929 0 0 696 B
master StartFinishScope net472 971ns 3.45ns 13.4ns 0.104 0 0 658 B
#6298 StartFinishSpan net6.0 406ns 0.489ns 1.89ns 0.00807 0 0 576 B
#6298 StartFinishSpan netcoreapp3.1 620ns 1.06ns 4.11ns 0.00781 0 0 576 B
#6298 StartFinishSpan net472 680ns 0.569ns 2.2ns 0.0916 0 0 578 B
#6298 StartFinishScope net6.0 491ns 0.864ns 3.35ns 0.00973 0 0 696 B
#6298 StartFinishScope netcoreapp3.1 668ns 0.845ns 3.27ns 0.00945 0 0 696 B
#6298 StartFinishScope net472 938ns 1.24ns 4.81ns 0.104 0 0 658 B
Benchmarks.Trace.TraceAnnotationsBenchmark - Faster 🎉 Same allocations ✔️

Faster 🎉 in #6298

Benchmark base/diff Base Median (ns) Diff Median (ns) Modality
Benchmarks.Trace.TraceAnnotationsBenchmark.RunOnMethodBegin‑net6.0 1.128 677.49 600.63

Raw results

Branch Method Toolchain Mean StdError StdDev Gen 0 Gen 1 Gen 2 Allocated
master RunOnMethodBegin net6.0 678ns 1.39ns 5.37ns 0.00992 0 0 696 B
master RunOnMethodBegin netcoreapp3.1 966ns 0.736ns 2.85ns 0.00918 0 0 696 B
master RunOnMethodBegin net472 1.1μs 2.28ns 8.83ns 0.104 0 0 658 B
#6298 RunOnMethodBegin net6.0 600ns 1.33ns 4.78ns 0.00991 0 0 696 B
#6298 RunOnMethodBegin netcoreapp3.1 957ns 1.45ns 5.61ns 0.00946 0 0 696 B
#6298 RunOnMethodBegin net472 1.21μs 0.77ns 2.98ns 0.104 0 0 658 B

@kevingosse kevingosse force-pushed the kevin/pss_dead_threads branch from a6a9f2a to 1c78cc5 Compare November 20, 2024 13:48
@kevingosse kevingosse merged commit ac2014c into master Nov 21, 2024
60 of 64 checks passed
@kevingosse kevingosse deleted the kevin/pss_dead_threads branch November 21, 2024 10:27
@github-actions github-actions bot added this to the vNext-v3 milestone Nov 21, 2024
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