Quick start

Demo:

Running the shell scripts below would plot the Figure2b in our paper.

bash demo.sh

All data and models can be downloaded in Google-drive.

It is a zip file (~843M) which contain a demo testing data and parameter files of compared models.

Then place the demo testing data in:

├── datasets
│   ├── brain
│   │   ├── OASI1_MRB
│   │   ├── testing-h5py
│   │   │   ├── demo
│   │   │   │   └── oasis1_disc1_OAS1_0042_MR1.h5
│   ├── cardiac
│   └── prostate

place the parameter files in:

├── model_zoo
│   ├── pretrained_seg
│   │   └── OASI1_MRB_3seg.pth
│   └── tab1
│       └── OASI1_MRB
│           ├── asl_ablation_seqmdrecnet_bg_step3_1_local__0.05_2D.pth
│           ├── csl_seqmri_unet__0.05_2D.pth
│           ├── csmri1__0.05.pth
│           ├── csmri2__5.pth
│           └── csmtl__0.05.pth