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Updated mappings, subclasses and removed inheritance from Mondo import #1197

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Updated mappings, subclasses and removed inheritance from Mondo import #1197

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f007add
Updated mappings, subclasses and removed inheritance from Mondo import
zoependlington Aug 4, 2021
139c67c
added inherited to mondo_exclude list
zoependlington Aug 4, 2021
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3,086 changes: 2,220 additions & 866 deletions efo-base.owl
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3,686 changes: 2,215 additions & 1,471 deletions src/ontology/components/mondo_efo_import.owl
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19 changes: 6 additions & 13 deletions src/ontology/components/mondo_efo_mappings.tsv
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264 changes: 28 additions & 236 deletions src/ontology/components/subclasses.owl
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73 changes: 48 additions & 25 deletions src/ontology/imports/hp_import.owl
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17 changes: 5 additions & 12 deletions src/ontology/imports/mondo_terms.txt
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40,132 changes: 22,271 additions & 17,861 deletions src/ontology/imports/uberon_import.owl
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41 changes: 41 additions & 0 deletions src/ontology/imports/uberon_terms.txt
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3 changes: 3 additions & 0 deletions src/ontology/iri_dependencies/mondo_exclude.txt
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17 changes: 5 additions & 12 deletions src/ontology/iri_dependencies/mondo_terms.txt
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41 changes: 41 additions & 0 deletions src/ontology/iri_dependencies/uberon_terms.txt
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23,224 changes: 11,649 additions & 11,575 deletions src/ontology/reports/basic-report.tsv
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6 changes: 3 additions & 3 deletions src/ontology/reports/class-count-by-prefix.tsv
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84,681 changes: 42,648 additions & 42,033 deletions src/ontology/reports/edges.tsv
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204,239 changes: 102,290 additions & 101,949 deletions src/ontology/reports/synonyms.tsv
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184,171 changes: 91,952 additions & 92,219 deletions src/ontology/reports/xrefs.tsv
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54 changes: 14 additions & 40 deletions src/templates/subclasses.csv
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