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Merge the maint-cime5.1 branch including ACME 5.1 changes #1065

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Feb 8, 2017
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e970844
Update melvin env
jgfouca Oct 6, 2016
27e0f1e
Update melvin env
jgfouca Oct 6, 2016
553f410
Merge branch 'jgfouca/fix_melvin_env' into master (PR #1089)
jgfouca Oct 6, 2016
2d20099
Added dcmip2012 test 2-0
david-m-hall Sep 29, 2016
2de1a9b
Added dcmip2012 test 2-1
david-m-hall Oct 3, 2016
da4a749
Added dcmip test 2-2. Added Rayleigh damping through custom forcing.
david-m-hall Oct 4, 2016
ac8d551
dcmip2.x tests: fine tuned namelist files. debugged CAM build.
david-m-hall Oct 6, 2016
7f8cbdd
Fix HOMME cmake files based on env changes on melvin
jgfouca Oct 7, 2016
d46cb0e
Fix HOMME cmake files based on env changes on melvin
jgfouca Oct 7, 2016
2a33eaf
Merge branch 'jgfouca/fix_melvin_homme' into master (PR #1093)
jgfouca Oct 7, 2016
ad83d1f
Fix for ATM_NCPL and ROF_NCPL
Oct 7, 2016
018d3c8
Fix for ATM_NCPL and ROF_NCPL
Oct 7, 2016
c6ae649
Changed the threshold value in QNEG3 from 1.e-12 to 1.e-9
Oct 10, 2016
bd8b5b3
removed/added some white spaces to get rid of diffs due to white spaces
singhbalwinder Oct 10, 2016
ccd2071
removed/added some white spaces to get rid of diffs due to white spaces
singhbalwinder Oct 10, 2016
07f6b37
Merge branch 'erichlf/cam/FC5AV1C04-ne4ne4' (PR #1094)
singhbalwinder Oct 11, 2016
da95fa3
Merge branch 'erichlf/cam/FC5AV1C04-ne4ne4' (PR #1094)
singhbalwinder Oct 11, 2016
aa8675b
Merge branch 'kaizhangpnl/atm/QNEG3' (PR #1096)
singhbalwinder Oct 11, 2016
644818c
Fixed bugs in rrtmg:
Oct 11, 2016
2e53d7f
Merge pull request #665 from ESMCI/jayeshkrishna/machinefiles/anlwork…
sarich Oct 12, 2016
4d19d39
Update cmake files for sandia machines for Homme
jgfouca Oct 12, 2016
24bc5d5
Merge branch 'jgfouca/update_homme_cmake_files_for_sandia' into maste…
jgfouca Oct 12, 2016
631a9e9
Added dcmip2012 test 2-0
david-m-hall Sep 29, 2016
ac4916b
Added dcmip2012 test 2-1
david-m-hall Oct 3, 2016
606038f
Added dcmip test 2-2. Added Rayleigh damping through custom forcing.
david-m-hall Oct 4, 2016
8980c5b
dcmip2.x tests: fine tuned namelist files. debugged CAM build.
david-m-hall Oct 6, 2016
75fafb2
ported dcmip2012 test 1.1 3d deformation
david-m-hall Oct 11, 2016
f77e4b0
ported dcmip2012 test 1.2: hadley-like meridional circulation
david-m-hall Oct 11, 2016
d683d4d
ported dcmip2013 test1.3: horizontal advection of thin clouds over or…
david-m-hall Oct 12, 2016
5523add
fine tuned 1.3 scripts. added #ifdef CAM switches to enable ACME build.
david-m-hall Oct 13, 2016
cf8d40a
removed example jpg files from git. added README comments.
david-m-hall Oct 13, 2016
08f0979
removed sample jpg plots from git.
david-m-hall Oct 13, 2016
36072b5
SEG-257: replaced 3 tests
wadeburgess Oct 13, 2016
b4d43cf
SEG-257: replaced 3 tests
wadeburgess Oct 13, 2016
9dd8ead
SEG-257: replaced 3 tests in update_acme_tests.py
wadeburgess Oct 13, 2016
685c12f
SEG-257: replaced 3 tests in update_acme_tests.py
wadeburgess Oct 13, 2016
03f3417
Merge branch 'pwburge/scripts-acme/seg257' into master (PR #1101)
jgfouca Oct 13, 2016
3f18e79
Merge branch 'pwburge/scripts-acme/seg257' into master (PR #1101)
jgfouca Oct 13, 2016
1d65c9c
Adds a runtime to dynamically switch linesearch in VSFM
Oct 13, 2016
37180e4
Fix the problem of the out-of-loop index.
kaizhangpnl Oct 15, 2016
7a47868
Change paths and tasks on anvil
rljacob Oct 18, 2016
b53bc86
Change paths and tasks on anvil
rljacob Oct 18, 2016
5ac353f
Added non-negativity constraints to aerosols
hwangacme Oct 18, 2016
a816904
Merge branch 'rljacob/blues/new-queue' (PR #1084)
jayeshkrishna Oct 20, 2016
397bdbd
Merge branch 'rljacob/blues/new-queue' (PR #1084)
jayeshkrishna Oct 20, 2016
e58da92
Removing comments from OpenMP macro definitions
amametjanov Oct 20, 2016
27fdc1b
Merge branch 'azamat/homme/rm-comments-omp-config' (PR #1109)
amametjanov Oct 20, 2016
f37552f
Merge branch 'bishtgautam/lnd/vsfm-density-fix' (PR #1102)
Oct 26, 2016
e4a576e
Merge branch 'origin/hwangacme/atm/aer_cb_bugfix' (PR #1104)
singhbalwinder Oct 27, 2016
293838a
refine the comment for the RRTMG bug fix
Oct 27, 2016
f0e8e87
refine the comment for the RRTMG bug fix
Oct 27, 2016
97f60d8
Merge branch 'kaizhangpnl/atm/bugfix_rrtmg' of github.com:ACME-Climat…
Oct 27, 2016
261ff23
removed the soft link that was inadvertently added to the repository
Oct 27, 2016
2041f12
minor changes
Oct 27, 2016
7558b1d
Update Anvil's MAX_TASKS_PER_NODE to occupy all cores
amametjanov Oct 28, 2016
9d744fd
Update Anvil's MAX_TASKS_PER_NODE to occupy all cores
amametjanov Oct 28, 2016
9e99c99
replaced pi in control mod with dd_pi from physical_constants
david-m-hall Oct 31, 2016
507b5ee
Merge branch 'kaizhangpnl/atm/bugfix_rrtmg' (PR #1097)
singhbalwinder Oct 31, 2016
5e2d72b
Fix several bugs critical to allowing alpha8 simulations.
jonbob Oct 27, 2016
d1689b5
Fix several bugs critical to allowing alpha8 simulations.
jonbob Oct 27, 2016
a48ebd4
Merge branch 'azamat/machines/update-anvil-max-tasks' (PR #1117)
jayeshkrishna Nov 2, 2016
0919054
Update anvil's MAX_TASKS/PES_PER_NODE to occupy all cores
jayeshkrishna Nov 2, 2016
7dfd9e0
Modify cice config_component.xml to use ACME settings
rljacob Nov 2, 2016
4b21fed
Restore ability to pass mask to CLMBuildNamelist
rljacob Nov 2, 2016
c07dcf7
Move two entries from mpasli config_component.xml
rljacob Nov 2, 2016
646d7e2
Merge branch 'rljacob/cime/config-update' into master (PR #1120)
jgfouca Nov 2, 2016
a67523f
Merge branch 'halldm2000/homme/dcmip12_test2.x' PR#1092
mt5555 Nov 4, 2016
f9f67c6
Merge branch 'halldm2000/homme/dcmip12_test1.x' PR #1100
mt5555 Nov 4, 2016
c350fbd
Merge branch 'jonbob/ocn/bug-fixes-for-alpha8' into master (PR #1115)
jonbob Nov 5, 2016
a07e9d4
Merge branch 'jonbob/ocn/bug-fixes-for-alpha8' into master (PR #1115)
jonbob Nov 5, 2016
3f409b3
replace "pi=>pi_shr_const" with pi_shr_const for PGI workaround
mt5555 Nov 5, 2016
7ad4e9e
Minor changes in HOMME cmake code to avoid building unused executables
oksanaguba Nov 5, 2016
04c58b3
Minor changes in HOMME cmake code to avoid building unused executables
oksanaguba Nov 6, 2016
01857f4
Merge branch 'mt5555/cam/pgi-shr-bugfix' PR #1127
mt5555 Nov 6, 2016
490e939
Merge branch 'oksanaguba/homme/minor-cmake-changes' PR#1128
mt5555 Nov 6, 2016
6c706cc
Merge pull request #718 from ESMCI/jayeshkrishna/machinefiles/add_Anvil
rljacob Nov 7, 2016
74b98a7
Cleanup ESMF output in cesm.log
rljacob Nov 8, 2016
070cae0
Merge branch 'rljacob/cime5.1/outputclean' into maint-cime5.1
rljacob Nov 8, 2016
33ea145
Update acme config_grids.xml
rljacob Nov 9, 2016
b1c97f6
Adds support for LANL IC machines
vanroekel Nov 7, 2016
733034b
Update acme allactive config compsets
rljacob Nov 9, 2016
2ad8e1f
Update drivers config_component for acme
rljacob Nov 9, 2016
2a8e3c7
Adds default project for LANL machines
vanroekel Nov 10, 2016
e140c02
Update acme config_pesall
rljacob Nov 10, 2016
4c297fb
Update acme config_pio.xml for mira
rljacob Nov 10, 2016
e8ff854
Add more ACME tests to update_acme_tests.py
rljacob Nov 11, 2016
130166b
Merge pull request #801 from ESMCI/rljacob/tests/update-acme
jgfouca Nov 11, 2016
26a9110
Merge pull request #800 from ESMCI/rljacob/cime5.1/config-update
jgfouca Nov 11, 2016
126bf9d
Add ability to input a gust factor to wind speed
rljacob Nov 12, 2016
93629e0
Turn on alternate vmag calculation
rljacob Nov 12, 2016
52beed2
Merge branch 'rljacob/cime/add-gustiness' into maint-cime5.1 (PR #805)
rljacob Nov 13, 2016
fe025fc
Merge pull request #779 from vanroekel/vanroekel/updateLANL
rljacob Nov 13, 2016
aea137a
Remove old env_mach_specific files from acme
rljacob Nov 13, 2016
fd89ca6
Update titan for acme machines
rljacob Nov 13, 2016
b590cd4
Update cetus/mira for acme
rljacob Nov 13, 2016
aa4ad72
Update melvin machine settings for acme
rljacob Nov 13, 2016
98ff8d5
Add intel entries for mesabi and itasca for acme
rljacob Nov 13, 2016
5caa85c
Update Depends.intel files for acme
rljacob Nov 13, 2016
0eb331d
Merge branch 'rljacob/cime5.1/update-acme-mach' into maint-cime5.1 (P…
rljacob Nov 13, 2016
8ed674f
Remove old cime2
rljacob Nov 13, 2016
4d4d49e
Merge commit '7d7641505ccfa7a0329c9e8f7b34ac2a91083a29' as 'cime'
rljacob Nov 13, 2016
a6a33c0
Change compset names in tests to match new ones
rljacob Nov 14, 2016
f7ec3e7
Change shr_orb_cosz calculation back to cime2
rljacob Nov 14, 2016
a4fae5c
Fix 2 mpasli items in config files
rljacob Nov 14, 2016
ac122de
Update config_components for ACME
rljacob Nov 14, 2016
89ba001
Update config_pesall.xml with missing configs.
rljacob Nov 14, 2016
d0a30f0
Change CMPASO_NYF compset name back
rljacob Nov 15, 2016
653ac2f
Remove a duplicate entry from config_pesall.xmo
rljacob Nov 15, 2016
b16199e
Add help string to allactive config_compsets
rljacob Nov 15, 2016
261312e
Add support for compsets with 20TR in datm
rljacob Nov 15, 2016
2bf8743
Add back support for 20TR time period
rljacob Nov 15, 2016
62e731c
Fix env settings for sandia climate machine
jgfouca Nov 15, 2016
843758f
Temporary revert of env changes on melvin and climate
jgfouca Nov 15, 2016
6b8175a
Restore auto-addition of compiler to baseline_name
jgfouca Nov 15, 2016
a59e399
Adds 3 new atmospheric compsets - (2000, 1850 and 20TR) AV1C-04P2
singhbalwinder Nov 15, 2016
b472bc3
Updates machine files for PNNL's constance machine for ACME
singhbalwinder Nov 16, 2016
920edef
Merge pull request #817 from ESMCI/singhbalwinder/machines/constance-…
jgfouca Nov 16, 2016
df34942
Correct layout for titan and low-res wcycl
rljacob Nov 16, 2016
b8e6be8
Fix mistake in create_test
jgfouca Nov 17, 2016
e05ce7b
Add oEC60to30wLI and oQU240wLI to ACME
mark-petersen Sep 26, 2016
5da1cd3
Update oQU240 to 160929 file date.
mark-petersen Sep 30, 2016
d114e20
Add RRS30to10wLI
mark-petersen Oct 8, 2016
f3c6edc
Add oRRS30to10wLI timestep flags
mark-petersen Oct 18, 2016
872c3af
Update WCYCL atmosphere to use 4P2 settings
rljacob Nov 17, 2016
0ba07aa
Make clm not a sharedlib for ACME
jgfouca Nov 18, 2016
dc2c806
Make infra work with ACME-style testmods
jgfouca Nov 18, 2016
9691946
More updates for 20TR compset
Nov 19, 2016
4892641
Changes to build/run on cori-haswell.
ndkeen Nov 20, 2016
0e1a449
Change homme to use BASELINE_ROOT instead of CCSM_BASELINE
jgfouca Nov 21, 2016
7c78b4c
Fix CCSM_BASELINE again
jgfouca Nov 22, 2016
f390523
Another HOMME fix
jgfouca Nov 22, 2016
a43653e
Changes to get tests building/running with cori-haswell.
ndkeen Nov 22, 2016
dbd6c60
take out the --cpu_binding=cores flag to srun
ndkeen Nov 23, 2016
761897a
Adjustments to building/running on KNL
ndkeen Nov 26, 2016
9af64c2
Fix log reporting for sharedlib builds
jgfouca Nov 28, 2016
359fe53
Add timing variables and update defaults
rljacob Nov 28, 2016
4f0928f
Set SAVE_TIMING default to TRUE
rljacob Nov 28, 2016
6b6f355
Fix typo in provenance.py
rljacob Nov 28, 2016
b679c0d
Change DRV_THREADING default to TRUE
rljacob Nov 28, 2016
27b0f82
Fixes DATM_CLMNCEP_YR_END for 20TR compset
Nov 29, 2016
96fa903
Add intel support to climate
jgfouca Nov 29, 2016
f4ce181
Give problems 5 hours on skybridge
jgfouca Nov 30, 2016
2123713
Copy additional file into caseroot/Tools if exists
wilke Nov 30, 2016
0b6fa8a
Avoid misspelling, define filename once
wilke Nov 30, 2016
7608344
Debug, check for existing directory
wilke Nov 30, 2016
7a12a09
Move long-running atm test to acme_integration
jgfouca Nov 30, 2016
fbcfdbd
ACME use driver_cpl config_pes for X,A,S cases
rljacob Dec 1, 2016
cb8fa13
Correct pe layout for MPASLISIA case
rljacob Dec 2, 2016
ff23f9a
Merge pull request #825 from ESMCI/ndk/machines/cori-haswell4
jgfouca Dec 2, 2016
a776b7e
Added option for printing mpirun command
wilke Dec 5, 2016
5f77205
Remove PFS test
jgfouca Dec 6, 2016
71965c2
Change NTHRDS_ESP default to 1
rljacob Dec 6, 2016
f2ef162
Increase Anvil default stack size for threaded runs
amametjanov Dec 6, 2016
639105a
Replaced aprun option with "aprun" variable, value computed in task_m…
wilke Dec 6, 2016
79dcb7f
Replace execution place holder string with path; Titan/aprun specific
wilke Dec 6, 2016
5ff684e
Added numa node computation and creation of aprun options for Titan
wilke Dec 6, 2016
d4e68f2
Minor rename of showq file
jgfouca Dec 7, 2016
023c550
Another minor naming change to provenance file
jgfouca Dec 7, 2016
fd89bc2
Update Mira compiler to the latest version
amametjanov Dec 7, 2016
a655f4d
Prioritize machine matching over grid,compset,size in PE matching
amametjanov Dec 7, 2016
903d229
Cleanup duplicate PE layouts
amametjanov Dec 7, 2016
75cb737
Revert "Cleanup duplicate PE layouts"
amametjanov Dec 7, 2016
e8fe4c7
Make sure glc_do_dynglacier is true for MPASLI
rljacob Dec 8, 2016
ea96182
Set up the ACME coupled config_pes.xml
rljacob Dec 8, 2016
900e4a2
Add entry for coupled cases on anvil in config_pes
rljacob Dec 8, 2016
1dea9f8
removed print statement
wilke Dec 8, 2016
21b31a9
removed print statements for debugging
wilke Dec 8, 2016
b7f0182
Merge branch 'rljacob/cime/cime5-upgrade' of github.com:ACME-Climate/…
wilke Dec 8, 2016
2fa5d7d
update 3 config_pes files after testing
rljacob Dec 9, 2016
eb63b00
Switch to using several config_pes.xml files
rljacob Dec 9, 2016
0befb46
Unshare sharedlibs, fix bug in machines.py
jgfouca Dec 9, 2016
dd88b9d
Switch skybridge and redsky back to openmpi-1.6
jgfouca Dec 9, 2016
d378d64
Revert "Switch to using several config_pes.xml files"
rljacob Dec 9, 2016
e2ab518
Replace ERP_Ln3.ne30_oEC.A_WCYCL2000 with ERP_Ld3.ne30_oEC.A_WCYCL2000
jgfouca Dec 9, 2016
8bcf1b2
Set CO2_PPMV value for ACME AV1C-04P2 compset
rljacob Dec 9, 2016
1121cfd
Update CIME5 config_grids w ocean cavities
rljacob Dec 9, 2016
0cdb201
For titan, don't put numa_node on aprun for pgi
rljacob Dec 10, 2016
0461683
Change skybridge and redsky envs to be exact match to cime2
jgfouca Dec 11, 2016
76338d7
Merge branch 'rljacob/cime/cime5-upgrade' (PR #1169)
rljacob Dec 12, 2016
e8bb07b
Hotfix for anvil SAVE_TIMING_DIR
rljacob Dec 13, 2016
974e900
bless_test_results: hot fix to support acme baseline naming
jgfouca Dec 13, 2016
b14bb3a
Fix pgiacc environment for titan
jgfouca Dec 13, 2016
369c6ae
Renaming Depends.titan.pgi_acc to Depends.titan.pgiacc
mrnorman Dec 14, 2016
a03a6d8
Update melvin gcc to 5.3.0
jgfouca Dec 15, 2016
9c5e80b
Adjust default walltimes for sandia HPCs
jgfouca Dec 16, 2016
3ae1e40
Special case for titan and pgiacc
jgfouca Dec 17, 2016
ff2aa10
compare_test_results: Support ACME's $compiler/$name baseline scheme
jgfouca Dec 18, 2016
56beabb
Changing pgi_acc to pgiacc in config_machines.xml
mrnorman Dec 19, 2016
de46be0
Only do titan pgiacc fix for ACME
jgfouca Dec 19, 2016
1bdcc52
Merge branch 'jgfouca/titan_env_fix' into master (PR #1175)
jgfouca Dec 19, 2016
66cd82c
Update redsky configuration
jgfouca Dec 21, 2016
5360ae6
Allow for suite-specific test walltimes in ACME
jgfouca Dec 21, 2016
2d03409
Fix machine config for edison.
jgfouca Dec 28, 2016
1cda5c0
Fix git describe errors on some platforms
jgfouca Jan 3, 2017
7c51bc3
Add expect statement for jobid search
jgfouca Jan 6, 2017
b58bd3f
Add back cron_script from pre-CIME5 ACME.
jgfouca Jan 9, 2017
d540245
Change cron_script to always submit to dashboard.
jgfouca Jan 10, 2017
bb201bd
update modules and PE layouts for cori-knl and cori-haswell
ndkeen Jan 16, 2017
e8dc7af
Update PE layouts for edison.
ndkeen Jan 17, 2017
263a03d
Updating Anvil defaults
amametjanov Jan 18, 2017
e6c10fe
Fix PE calculation for Cobalt
amametjanov Jan 18, 2017
1468b5d
Make Mira and Cetus PE calculations identical
amametjanov Jan 18, 2017
fbc86bd
Make Mira and Cetus Depends files identical
amametjanov Jan 18, 2017
92549ae
Adding default F-case PE layouts for Anvil
amametjanov Jan 18, 2017
ffdceab
Changes to allow for the HOMME test to pass for cori-haswell and cori…
ndkeen Jan 19, 2017
a5d3a77
Simplify library paths
amametjanov Jan 20, 2017
3b5c847
Merge branch 'ndk/machinefiles/cori-haswell-knl' (PR #1222)
ndkeen Jan 21, 2017
e544bd2
Fixes to provenance/timing saving
jgfouca Dec 30, 2016
5cbd44f
Fixes based on review
jgfouca Jan 3, 2017
dcf673d
Address additional feedback for PR.
jgfouca Jan 4, 2017
0515d9a
Change gzip utility function to preserve timestamps of original file
jgfouca Jan 5, 2017
f622e43
Add timestamp to output_error_path
jgfouca Jan 12, 2017
3a0e057
Revert "Add timestamp to output_error_path"
jgfouca Jan 17, 2017
5eec994
Better solution for getting the jobid into slurm output files
jgfouca Jan 17, 2017
988414b
Fix syslog_jobid path name
jgfouca Jan 17, 2017
6a553e9
Make Cetus build settings identical as Mira's
amametjanov Jan 19, 2017
ccd8424
When all PEs fit in one node, request at least one node
amametjanov Jan 21, 2017
875b501
Update default PEs on Cetus
amametjanov Jan 21, 2017
49de920
Merge branch 'azamat/cetus/fix-runjob-settings' (PR #1229)
amametjanov Jan 21, 2017
27eb3e2
rename corip1 as cori-haswell and cori-knl
Jan 21, 2017
71d3798
Update defaults
amametjanov Jan 21, 2017
fd92152
Merge branch 'azamat/anvil/improve-defaults' (PR #1225)
amametjanov Jan 21, 2017
10e7e16
Update Anvil Intel compiler to v17
amametjanov Jan 25, 2017
097df09
Update Blues and Anvil machine files for HOMME
amametjanov Jan 25, 2017
803a453
Merge branch 'ACME-Climate/jgfouca/cime/perf_data_fixes' (PR #1201)
rljacob Jan 26, 2017
a18c125
Merge branch 'azamat/machfiles/homme-on-anvil' (PR #1119)
amametjanov Jan 26, 2017
b266431
Fix PIO stride at Mira+Cetus to 128 to avoid OOM errors
amametjanov Jan 26, 2017
f32404b
Merge branch 'azamat/mira/default-pio-stride' (PR #1242)
amametjanov Jan 26, 2017
2896bbf
Merge branch 'rljacob/acmemerge-to-cime51' into rljacob/bring-acmecim…
rljacob Jan 27, 2017
587001d
Merge branch 'rljacob/bring-acmecime5.1' into jgfouca/5.1_integration
jgfouca Jan 28, 2017
3ab9e35
pylint fixes
jgfouca Jan 28, 2017
9288cd0
Implement ACME's test suite timings
jgfouca Jan 28, 2017
c78a023
More pylint fixes
jgfouca Jan 28, 2017
3595b10
Replace CESMSCRATCHROOT with CIME_OUTPUT_ROOT
jgfouca Jan 28, 2017
436af45
Attempt to reconcile config_component stuff
jgfouca Jan 28, 2017
b78f6af
Remove version attrs from batch systems
jgfouca Jan 28, 2017
beb8eca
Remove deprecated walltimes tag
jgfouca Jan 28, 2017
e66eca7
Progress on reconciling xml changes
jgfouca Jan 28, 2017
5877a9c
Undo big changes to buildnml that for some reason git added
jgfouca Jan 28, 2017
cd2ea55
Update ACME config_machines change to use correct syntax
jgfouca Jan 28, 2017
2525438
Turn sharedlib sharing back on
jgfouca Jan 28, 2017
9ce90f1
Tests on melvin working
jgfouca Jan 29, 2017
84fa42a
Remove some unused imports
jgfouca Jan 29, 2017
ed50b13
Merge branch 'master' into jgfouca/5.1_integration
jgfouca Feb 3, 2017
051a8f0
Add whitespaces to ensure correct resolution
jgfouca Feb 3, 2017
27ee525
Reset namelist_defaults_drv to current master
jgfouca Feb 4, 2017
57deac7
Add gust_fac
jgfouca Feb 4, 2017
355ae17
Restore namelist_definition_drv.xml to ESMCI master version
jgfouca Feb 4, 2017
3549126
Restore shr_orb_mod.F90 to ESMCI master version
rljacob Feb 7, 2017
72deffd
Fix env/shell calls in XML
jgfouca Feb 7, 2017
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63 changes: 63 additions & 0 deletions cime_config/acme/allactive/config_compsets.xml
Original file line number Diff line number Diff line change
Expand Up @@ -2,28 +2,91 @@

<compsets>

<help>

=========================================
compset naming convention
=========================================
The compset longname below has the specified order
atm, lnd, ice, ocn, river, glc wave model-options

The notation for the compset longname is
TIME_ATM[%phys]_LND[%phys]_ICE[%phys]_OCN[%phys]_ROF[%phys]_GLC[%phys]_WAV[%phys][_ESP%phys][_BGC%phys]
Where for the CAM specific compsets below the following is supported
TIME = Time period (e.g. 2000, HIST, RCP8...)
ATM = [CAM4, CAM5, SATM]
LND = [CLM40, CLM45, CLM50, SLND]
ICE = [MPASCICE, CICE, DICE, SICE]
OCN = [MPASO, DOCN, ,AQUAP, SOCN]
ROF = [RTM, MOSART, SROF]
GLC = [MPASLISIA, MPASLIALB, CISM1, CISM2, SGLC]
WAV = [WW3, DWAV, XWAV, SWAV]
ESP = [SESP]
BGC = optional BGC scenario

The OPTIONAL %phys attributes specify submodes of the given system
For example DOCN%DOM is the data ocean model for DOCN
ALL the possible %phys choices for each component are listed
with the -list command for create_newcase
ALL data models must have a %phys option that corresponds to the data model mode

Each compset node is associated with the following elements
- lname
- alias
- support (optional description of the support level for this compset)
Each compset node can also have the following attributes
- grid (optional regular expression match for grid to work with the compset)

</help>

<!-- ACME v1 science compsets -->

<compset>
<alias>A_WCYCL2000</alias >
<lname>2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL2000S</alias >
<lname>2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL1850</alias>
<lname>1850_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL1850S</alias>
<lname>1850_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL20TR</alias>
<lname>20TR_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL20TRS</alias>
<lname>20TR_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_CRYO</alias>
<lname>2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_RTM_MPASLIALB_SWAV</lname>
</compset>

<!-- ACME backup compsets -->
<compset>
<alias>A_WCYCL1850_v0atm</alias>
<lname>1850_CAM5_CLM45%SP_MPASCICE_MPASO_MOSART_SGLC_SWAV</lname>
</compset>

<compset>
<alias>A_WCYCL2000_v0atm</alias>
<lname>2000_CAM5_CLM45%SP_MPASCICE_MPASO_MOSART_SGLC_SWAVi</lname>
</compset>

<!-- ACME BG compsets -->

<compset>
Expand Down
87 changes: 82 additions & 5 deletions cime_config/acme/allactive/config_compsets.xml.cime2
Original file line number Diff line number Diff line change
Expand Up @@ -78,11 +78,17 @@ value of RUN_STARTDATE will be date2.

<!-- ACME v1 science compsets -->
<COMPSET sname="ACME_WCYCL2000" alias="A_WCYCL2000" >2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL2000S" alias="A_WCYCL2000S">2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL1850" alias="A_WCYCL1850" >1850_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL1850S" alias="A_WCYCL1850S" >1850_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL20TR" alias="A_WCYCL20TR" >20TR_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL20TRS" alias="A_WCYCL20TRS" >20TR_CAM5%AV1C-L_CLM45%SPBC_MPASCICE%SPUNUP_MPASO%SPUNUP_MOSART_SGLC_SWAV</COMPSET>

<COMPSET sname="ACME_CRYO" alias="A_CRYO" >2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_RTM_MPASLIALB_SWAV</COMPSET>
<!-- ACME backup compsets -->
<COMPSET sname="ACME_WCYCL1850_v0atm" alias="A_WCYCL1850_v0atm" >1850_CAM5_CLM45%SP_MPASCICE_MPASO_MOSART_SGLC_SWAV</COMPSET>
<COMPSET sname="ACME_WCYCL2000_v0atm" alias="A_WCYCL2000_v0atm" >2000_CAM5_CLM45%SP_MPASCICE_MPASO_MOSART_SGLC_SWAV</COMPSET>

<COMPSET sname="ACME_CRYO" alias="A_CRYO" >2000_CAM5%AV1C-L_CLM45%SPBC_MPASCICE_MPASO_RTM_MPASLIALB_SWAV</COMPSET>

<!-- compset A assumes an rx1 grid -->
<COMPSET sname="A2000" alias="A" grid="r%rx1">2000_DATM%NYF_DLND%NULL_DICE%SSMI_DOCN%DOM_DROF%NYF_SGLC_SWAV</COMPSET>
Expand Down Expand Up @@ -234,14 +240,25 @@ value of RUN_STARTDATE will be date2.
<COMPSET sname="F_1850_CAM5_AV1C-01" alias="F1850C5AV1C-01" >1850_CAM5%AV1C-01_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-02" alias="F1850C5AV1C-02" >1850_CAM5%AV1C-02_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-03" alias="F1850C5AV1C-03" >1850_CAM5%AV1C-03_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-04" alias="F1850C5AV1C-04" >1850_CAM5%AV1C-04_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-04P" alias="F1850C5AV1C-04P" >1850_CAM5%AV1C-04P_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-04P2" alias="F1850C5AV1C-04P2">1850_CAM5%AV1C-04P2_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850_CAM5_AV1C-L" alias="F1850C5AV1C-L" >1850_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-01" alias="FC5AV1C-01" >2000_CAM5%AV1C-01_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-02" alias="FC5AV1C-02" >2000_CAM5%AV1C-02_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-03" alias="FC5AV1C-03" >2000_CAM5%AV1C-03_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-04" alias="FC5AV1C-04" >2000_CAM5%AV1C-04_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-04P" alias="FC5AV1C-04P" >2000_CAM5%AV1C-04P_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-04P2" alias="FC5AV1C-04P2" >2000_CAM5%AV1C-04P2_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1C-L" alias="FC5AV1C-L" >2000_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1F" alias="FC5AV1F" >2000_CAM5%AV1F_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1F-00" alias="FC5AV1F-00" >2000_CAM5%AV1F-00_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_AV1F-01" alias="FC5AV1F-01" >2000_CAM5%AV1F-01_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850-2000_CAM5_AV1C-03" alias="F20TRC5AV1C-03" >20TR_CAM5%AV1C-03_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850-2000_CAM5_AV1C-04" alias="F20TRC5AV1C-04" >20TR_CAM5%AV1C-04_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850-2000_CAM5_AV1C-04P" alias="F20TRC5AV1C-04P" >20TR_CAM5%AV1C-04P_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850-2000_CAM5_AV1C-04P2" alias="F20TRC5AV1C-04P2">20TR_CAM5%AV1C-04P2_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_1850-2000_CAM5_AV1C-L" alias="F20TRC5AV1C-L" >20TR_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_ATMMODCOSP" alias="FC5ATMMODCOSP" >2000_CAM5%ATMMODCOSP_CLM45%SPBC_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_CAM5_COSP" alias="FC5COSP" >2000_CAM5%COSP_CLM40%SP_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
<COMPSET sname="F_2000_C5UNI" alias="FC5UNI" >2000_CAM5%UNI_CLM40%SP_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV</COMPSET>
Expand Down Expand Up @@ -688,6 +705,9 @@ GEOS => GEOS5 meteorology for "stand-alone" CAM
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-01" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-02" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-03" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-04" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-04P" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-04P2">-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1C-L" >-clubb_sgs -microphys mg2 -chem linoz_mam4_resus_mom_soag -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1F" >-clubb_sgs -microphys mg2 -chem trop_mam4_resus -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
<CAM_CONFIG_OPTS compset="_CAM5%AV1F-00" >-clubb_sgs -microphys mg2 -chem trop_mam4_resus -rain_evap_to_coarse_aero -nlev 72</CAM_CONFIG_OPTS>
Expand Down Expand Up @@ -788,14 +808,25 @@ GEOS => GEOS5 meteorology for "stand-alone" CAM
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-01">1850_cam5_av1c-01</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-02">1850_cam5_av1c-02</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-03">1850_cam5_av1c-03</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-L" >1850_cam5_av1c-03</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-04">1850_cam5_av1c-04</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-04P">1850_cam5_av1c-04p</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-04P2">1850_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1850_CAM5.*AV1C-L" >1850_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-01">2000_cam5_av1c-01</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-02">2000_cam5_av1c-02</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-03">2000_cam5_av1c-03</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-L" >2000_cam5_av1c-03</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-04">2000_cam5_av1c-04</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-04P">2000_cam5_av1c-04p</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-04P2">2000_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1C-L" >2000_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1F" >2000_cam5_av1f</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1F-00">2000_cam5_av1f-00</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5.*AV1F-01">2000_cam5_av1f-01</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="20TR_CAM5.*AV1C-03">20TR_cam5_av1c-03</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="20TR_CAM5.*AV1C-04">20TR_cam5_av1c-04</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="20TR_CAM5.*AV1C-04P">20TR_cam5_av1c-04p</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="20TR_CAM5.*AV1C-04P2">20TR_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="20TR_CAM5.*AV1C-L" >20TR_cam5_av1c-04p2</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM5%COSP" >2000_cam5_cosp</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="2000_CAM4%WCMX" >waccmx_2000_cam4</CAM_NML_USE_CASE>
<CAM_NML_USE_CASE compset="1996_CAM4%WCMX" >waccmx_1996_cam4</CAM_NML_USE_CASE>
Expand Down Expand Up @@ -860,7 +891,10 @@ GEOS => GEOS5 meteorology for "stand-alone" CAM
<desc compset="_CAM5.*AV1C-01" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v01:</desc>
<desc compset="_CAM5.*AV1C-02" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v02:</desc>
<desc compset="_CAM5.*AV1C-03" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v03:</desc>
<desc compset="_CAM5.*AV1C-L" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v03:</desc>
<desc compset="_CAM5.*AV1C-04" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v04:</desc>
<desc compset="_CAM5.*AV1C-04P" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v04p:</desc>
<desc compset="_CAM5.*AV1C-04P2">CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v04p2:</desc>
<desc compset="_CAM5.*AV1C-L" >CAM with complete set of ACME atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v04p:</desc>
<desc compset="_CAM5.*AV1F" >CAM with familiar set of ACME atmospheric mods for V1 (72 Layers model):</desc>
<desc compset="_CAM5.*AV1F-00" >CAM with familiar set of ACME atmospheric mods for V1 (72 Layers model)- v00:</desc>
<desc compset="_CAM5.*AV1F-01" >CAM with familiar set of ACME atmospheric mods for V1 (72 Layers model) and ACES4BGC SOAG emissions- v01:</desc>
Expand Down Expand Up @@ -1078,6 +1112,31 @@ CLM50%[^_]*SP => clm5.0 Satellite phenology
CLM50%[^_]*BGC => clm5.0 BGC (CN with vertically resolved soil BGC, based on Century with Methane)
</help>

<!-- ================================================================================== -->
<!-- SECTION: component MPAS-CICE -->
<!-- ================================================================================== -->

<MPASCICE_IC_MODE compset="MPASCICE_">cold_start</MPASCICE_IC_MODE>
<MPASCICE_IC_MODE compset="MPASCICE%SPUNUP">spunup</MPASCICE_IC_MODE>

<!-- ======================================= -->
<!-- USER_DEFINED section -->
<!-- Add new values for -->
<!-- MPASCICE_IC_MODE -->
<!-- here -->
<!-- ======================================= -->

<desc compset="MPASCICE%SPUNUP">spunup mpas-cice:</desc>
<desc compset="MPASCICE_">cold_start mpas-cice:</desc>

<help>
=========================================
MPASCICE naming conventions in compset name
=========================================
MPASCICE => use cold start initial conditions for MPASCICE
MPASCICE%SPUNUP => use spunup initial conditions for MPASCICE
</help>

<!-- ================================================================================== -->
<!-- SECTION: component cice -->
<!-- ================================================================================== -->
Expand Down Expand Up @@ -1822,6 +1881,8 @@ DOCN%COPY => docn copy mode
<ATM_NCPL compset="_MPASO" > 1</ATM_NCPL>

<ATM_NCPL compset=".+" grid="a%0.23x0.31">96</ATM_NCPL>
<ATM_NCPL compset=".+" grid="a%ne4np4" >12</ATM_NCPL>
<ATM_NCPL compset=".+" grid="a%ne11np4" >12</ATM_NCPL>
<ATM_NCPL compset=".+" grid="a%ne60np4" >96</ATM_NCPL>
<ATM_NCPL compset=".+" grid="a%ne120np4" >96</ATM_NCPL>
<ATM_NCPL compset=".+" grid="a%ne240np4" >144</ATM_NCPL>
Expand Down Expand Up @@ -1856,6 +1917,8 @@ DOCN%COPY => docn copy mode
<CPL_SEQ_OPTION compset="_MPASCICE.*_MPASO" >RASM_OPTION1</CPL_SEQ_OPTION>

<ROF_NCPL compset=".+" >8</ROF_NCPL>
<ROF_NCPL compset=".+" grid="a%ne4np4" >6</ROF_NCPL>
<ROF_NCPL compset=".+" grid="a%ne11np4" >6</ROF_NCPL>
<ROF_NCPL compset="_DATM.*_POP2" >$ATM_NCPL</ROF_NCPL>
<ROF_NCPL compset="_DATM.*_MPASO" >$ATM_NCPL</ROF_NCPL>
<ROF_NCPL compset="_DATM.*_DOCN%SOM" >$ATM_NCPL</ROF_NCPL>
Expand Down Expand Up @@ -1908,12 +1971,22 @@ DOCN%COPY => docn copy mode
<GLC_NCPL compset="_CAM.*_CLM.*MPASO">1</GLC_NCPL>
<ROF_NCPL compset="_CAM.*_CLM.*MPASO">8</ROF_NCPL>

<!-- coupler intervals for CAM, CLM, and MPASO ultra low-res testing compset -->
<NCPL_BASE_PERIOD compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">day </NCPL_BASE_PERIOD>
<ATM_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">12</ATM_NCPL>
<LND_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">12</LND_NCPL>
<ICE_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">12</ICE_NCPL>
<OCN_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">12</OCN_NCPL>
<GLC_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">1</GLC_NCPL>
<ROF_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne11np4">4</ROF_NCPL>

<!-- coupler intervals for CAM, CLM, and MPASO high-res compset -->
<NCPL_BASE_PERIOD compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">day </NCPL_BASE_PERIOD>
<ATM_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">96</ATM_NCPL>
<LND_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">96</LND_NCPL>
<ICE_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">96</ICE_NCPL>
<OCN_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">96</OCN_NCPL>
<OCN_NCPL compset="_CAM.*_CLM.*MPASO" grid="oi%oRRS18to6">48</OCN_NCPL>
<OCN_NCPL compset="_CAM.*_CLM.*MPASO" grid="oi%oRRS15to5">96</OCN_NCPL>
<GLC_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">1</GLC_NCPL>
<ROF_NCPL compset="_CAM.*_CLM.*MPASO" grid="a%ne120np4">8</ROF_NCPL>

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<CCSM_CO2_PPMV compset="^AR97" >368.9</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^2003" >367.0</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^1850.+AV1C" >284.725</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^20TR.+AV1C" >284.725</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^2000.+AV1C-03" >368.865</CCSM_CO2_PPMV> <!-- note: previous versions of 2000_AV1C used the 367ppm default -->
<CCSM_CO2_PPMV compset="^2000.+AV1C-04" >368.865</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^2000.+AV1C-04P" >368.865</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^2000.+AV1C-04P2" >368.865</CCSM_CO2_PPMV>
<CCSM_CO2_PPMV compset="^2000.+AV1C-L" >368.865</CCSM_CO2_PPMV>

<!-- Override values based on CAM (WACCM) chemistry -->
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