Remove methylink script and plug in package instead #107
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| name: Linting | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| branches: [main, master] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Test linting | |
| uses: snakemake/snakemake-github-action@v1.23.0 | |
| with: | |
| directory: . | |
| snakefile: workflow/Snakefile | |
| args: "--lint --cores 1 --configfile .test/config.yaml" |