Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Expose motif match significance threshold to users for motif enrichment #34

Open
aron0093 opened this issue Sep 5, 2024 · 1 comment
Open

Expose motif match significance threshold to users for motif enrichment #34

aron0093 opened this issue Sep 5, 2024 · 1 comment
Assignees
@adamklie @aron0093
Labels
enhancement New feature or request
Milestone
2024 Gene Program...

Comments

@aron0093
Copy link
Collaborator

aron0093 commented Sep 5, 2024

Currently the motif enrichment considers all motif matches that have a FDR < 0.05 While this threshold can be adjusted in the internals it is not a parameter in the user-facing enrichment function.
@aron0093 aron0093 added the enhancement New feature or request label Sep 5, 2024
@aron0093 aron0093 self-assigned this Sep 5, 2024
@adamklie
Copy link
Collaborator

This will be implemented along with #45 in the next pull request

@adamklie adamklie added this to the 2024 Gene Program Jamboree milestone Sep 10, 2024
@adamklie adamklie self-assigned this Sep 10, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@adamklie adamklie

@aron0093 aron0093

Labels
enhancement New feature or request
Projects
None yet
Milestone
2024 Gene Program Jamboree
Development

No branches or pull requests
2 participants
@adamklie @aron0093