Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Description
The
append
method ofPath::Tiny
assumes data are provided as a whole: it therefore opens, writes out and closes the file.Used in a loop, this method opens and closes the underlying file every time. This is not desireable for many reasons.
Some exception checking are also added.
Use case
The pipeline analysis "Xref_TSV" takes forever to run and may also fails - especially on SLURM.
Benefits
Enhanced performance. Better use of the FS.
Possible Drawbacks
None.
Testing
Test suite runs fine
Dependencies
None