compartment to json fix

Fxe · Nov 13, 2024 · 63f0aa3 · 63f0aa3
1 parent 583a87f
commit 63f0aa3
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/cobrakbase/core/kbasefba/fbamodel.py b/cobrakbase/core/kbasefba/fbamodel.py
@@ -392,7 +392,7 @@ def _to_json(self):
         data = {}
         ignore = {"modelcompounds", "modelreactions", "biomasses", "modelcompartments"}
 
-        data["modelcompartments"] = converter.build_model_compartments()
+        data["modelcompartments"] = list(converter.build_model_compartments().values())
 
         for key in self.data_keys:
             if key not in ignore: