Update cram-js to avoid off-by-one bug compensation

GMOD · May 16, 2022 · 1f83c59 · 1f83c59
1 parent 33e0ed8
commit 1f83c59
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Showing 3 changed files with 7 additions and 6 deletions.
diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json
@@ -35,7 +35,7 @@
   "dependencies": {
     "@babel/runtime": "^7.17.9",
     "@gmod/bam": "^1.1.15",
-    "@gmod/cram": "^1.6.3",
+    "@gmod/cram": "^1.6.4",
     "@material-ui/icons": "^4.9.1",
     "color": "^3.1.2",
     "copy-to-clipboard": "^3.3.1",

diff --git a/plugins/linear-comparative-view/src/ReadVsRef.tsx b/plugins/linear-comparative-view/src/ReadVsRef.tsx
@@ -204,10 +204,11 @@ export function WindowSizeDlg(props: {
               {
                 refName: saRef,
                 start: +saStart - 1,
-                end: +saStart + 1,
+                end: +saStart,
               },
             ],
           })) as Feature[]
+
           const result = feats.find(
             f =>
               f.get('name') === preFeature.get('name') &&

diff --git a/yarn.lock b/yarn.lock
@@ -1419,10 +1419,10 @@
   dependencies:
     long "^4.0.0"
 
-"@gmod/cram@^1.6.3":
-  version "1.6.3"
-  resolved "https://registry.yarnpkg.com/@gmod/cram/-/cram-1.6.3.tgz#250775a681904477cb06988a10ad0253d4dc69aa"
-  integrity sha512-fuKmrFbhpiQLkUnMj64kujKjF0ZC8ZF2EvL479ilwRq9vsMdlxpWdcC/pmEYdM+OgyHy8aZNBRmkt/rKrDJzrw==
+"@gmod/cram@^1.6.4":
+  version "1.6.4"
+  resolved "https://registry.yarnpkg.com/@gmod/cram/-/cram-1.6.4.tgz#4c585238ba201381f2e794785f6497b0b2c3bd1a"
+  integrity sha512-uj3BOukiQmL9JwJFMN7qqkvhfWMVVYhymrUA6+z6YMg3u107azw9Oxip6UEUHlVtrJhh2jyLDYgpewFLghJZew==
   dependencies:
     "@gmod/binary-parser" "^1.3.5"
     "@jkbonfield/htscodecs" "^0.5.1"