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Turn all short aliases into long form (#474)
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To make things more readable, we'll shift our documentation to use long form arguments by default. Starting from the common aliases R, J, B, U, CPT, G and W, and moving on to all others spread across the API Reference page.

Co-authored-by: Dongdong Tian <seisman.info@gmail.com>
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@weiji14 @seisman
weiji14 and seisman authored Jun 4, 2020
1 parent 2bc6828 commit 0267dd1
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152 changes: 88 additions & 64 deletions pygmt/base_plotting.py
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Original file line number Diff line number Diff line change
Expand Up @@ -70,6 +70,7 @@ def _preprocess(self, **kwargs): # pylint: disable=no-self-use
W="shorelines",
G="land",
S="water",
U="timestamp",
)
@kwargs_to_strings(R="sequence")
def coast(self, **kwargs):
Expand Down Expand Up @@ -100,34 +101,34 @@ def coast(self, **kwargs):
----------
{J}
{R}
A : int, float, or str
area_thresh : int, float, or str
``'min_area[/min_level/max_level][+ag|i|s|S][+r|l][+ppercent]'``
Features with an area smaller than min_area in km^2 or of
hierarchical level that is lower than min_level or higher than
max_level will not be plotted.
{B}
C : str
Set the shade, color, or pattern for lakes and river-lakes.
D : str
resolution : str
Selects the resolution of the data set to use ((f)ull, (h)igh,
(i)ntermediate, (l)ow, and (c)rude).
G : str
land : str
Select filling or clipping of “dry” areas.
I : str
rivers : str
``'river[/pen]'``
Draw rivers. Specify the type of rivers and [optionally] append pen
attributes.
L : str
map_scale : str
``'[g|j|J|n|x]refpoint'``
Draws a simple map scale centered on the reference point specified.
N : str
borders : str
``'border[/pen]'``
Draw political boundaries. Specify the type of boundary and
[optionally] append pen attributes
S : str
water : str
Select filling or clipping of “wet” areas.
{U}
W : str
shorelines : str
``'[level/]pen'``
Draw shorelines [Default is no shorelines]. Append pen attributes.
Expand Down Expand Up @@ -166,23 +167,24 @@ def colorbar(self, **kwargs):
Parameters
----------
position (D) : str
position : str
``[g|j|J|n|x]refpoint[+wlength[/width]][+e[b|f][length]][+h|v]
[+jjustify][+m[a|c|l|u]][+n[txt]][+odx[/dy]]``. Defines the
reference point on the map for the color scale using one of four
coordinate systems: (1) Use -Dg for map (user) coordinates, (2) use
-Dj or -DJ for setting refpoint via a 2-char justification code
that refers to the (invisible) map domain rectangle, (3) use -Dn
for normalized (0-1) coordinates, or (4) use -Dx for plot
coordinates (inches, cm, etc.). All but -Dx requires both -R and
-J to be specified. Append +w followed by the length and width of
the color bar. If width is not specified then it is set to 4% of
the given length. Give a negative length to reverse the scale bar.
Append +h to get a horizontal scale [Default is vertical (+v)]. By
default, the anchor point on the scale is assumed to be the bottom
left corner (BL), but this can be changed by appending +j followed
by a 2-char justification code justify.
box (F) : bool or str
coordinate systems: (1) Use *g* for map (user) coordinates, (2) use
*j* or *J* for setting refpoint via a 2-char justification code
that refers to the (invisible) map domain rectangle, (3) use *n*
for normalized (0-1) coordinates, or (4) use *x* for plot
coordinates (inches, cm, etc.). All but *x* requires both *region*
and *projection* to be specified. Append +w followed by the length
and width of the color bar. If width is not specified then it is
set to 4% of the given length. Give a negative length to reverse
the scale bar. Append +h to get a horizontal scale
[Default is vertical (+v)]. By default, the anchor point on the
scale is assumed to be the bottom left corner (BL), but this can be
changed by appending +j followed by a 2-char justification code
*justify*.
box : bool or str
``[+cclearances][+gfill][+i[[gap/]pen]][+p[pen]][+r[radius]]
[+s[[dx/dy/][shade]]]``. If set to True, draws a rectangular
border around the color scale. Alternatively, specify a different
Expand All @@ -198,12 +200,12 @@ def colorbar(self, **kwargs):
offset background shaded region. Here, dx/dy indicates the shift
relative to the foreground frame [4p/-4p] and shade sets the fill
style to use for shading [gray50].
truncate (G) : list or str
truncate : list or str
``zlo/zhi`` Truncate the incoming CPT so that the lowest and
highest z-levels are to zlo and zhi. If one of these equal NaN then
we leave that end of the CPT alone. The truncation takes place
before the plotting.
scale (W) : float
scale : float
Multiply all z-values in the CPT by the provided scale. By default
the CPT is used as is.
Expand All @@ -223,7 +225,7 @@ def colorbar(self, **kwargs):
Q="cut",
R="region",
S="resample",
U="logo",
U="timestamp",
W="pen",
)
@kwargs_to_strings(R="sequence", L="sequence", A="sequence_plus")
Expand All @@ -241,7 +243,7 @@ def grdcontour(self, grid, **kwargs):
----------
grid : str or xarray.DataArray
The file name of the input grid or the grid loaded as a DataArray.
C : str or int
interval : str or int
Specify the contour lines to generate.
- The filename of a `CPT` file where the color boundaries will
Expand All @@ -251,7 +253,7 @@ def grdcontour(self, grid, **kwargs):
angle (col 3)
- A fixed contour interval ``cont_int`` or a single contour with
``+[cont_int]``
A : str, int, or list
annotation : str, int, or list
Specify or disable annotated contour levels, modifies annotated
contours specified in ``-C``.
Expand All @@ -261,17 +263,18 @@ def grdcontour(self, grid, **kwargs):
- Optional label modifiers can be specified as a single string
``'[annot_int]+e'`` or with a list of options
``([annot_int], 'e', 'f10p', 'gred')``.
L : str or list of 2 ints
limit : str or list of 2 ints
Do no draw contours below `low` or above `high`, specify as string
``'[low]/[high]'`` or list ``[low,high]``.
Q : string or int
cut : str or int
Do not draw contours with less than `cut` number of points.
S : string or int
resample : str or int
Resample smoothing factor.
{J}
{R}
{B}
{G}
{U}
{W}
"""
kwargs = self._preprocess(**kwargs)
Expand Down Expand Up @@ -439,6 +442,7 @@ def grdview(self, grid, **kwargs):
i="columns",
l="label",
C="cmap",
U="timestamp",
)
@kwargs_to_strings(R="sequence", i="sequence_comma")
def plot(self, x=None, y=None, data=None, sizes=None, direction=None, **kwargs):
Expand Down Expand Up @@ -471,7 +475,7 @@ def plot(self, x=None, y=None, data=None, sizes=None, direction=None, **kwargs):
Parameters
----------
x, y : float or 1d arrays
x/y : float or 1d arrays
The x and y coordinates, or arrays of x and y coordinates of the
data points
data : str or 2d array
Expand Down Expand Up @@ -501,12 +505,12 @@ def plot(self, x=None, y=None, data=None, sizes=None, direction=None, **kwargs):
``'[x|y|X|Y][+a][+cl|f][+n][+wcap][+ppen]'``.
Draw symmetrical error bars.
{G}
S : str
style : str
Plot symbols (including vectors, pie slices, fronts, decorated or
quoted lines).
{W}
{U}
l : str
label : str
Add a legend entry for the symbol or line being plotted.
"""
kwargs = self._preprocess(**kwargs)
Expand Down Expand Up @@ -575,7 +579,7 @@ def contour(self, x=None, y=None, z=None, data=None, **kwargs):
Parameters
----------
x, y, z : 1d arrays
x/y/z : 1d arrays
Arrays of x and y coordinates and values z of the data points.
data : str or 2d array
Either a data file name or a 2d numpy array with the tabular data.
Expand All @@ -586,21 +590,26 @@ def contour(self, x=None, y=None, z=None, data=None, **kwargs):
By default, geographic line segments are drawn as great circle
arcs. To draw them as straight lines, use *A*.
{B}
C : Contour file or level(s)
D : Dump contour coordinates
E : Network information
G : Placement of labels
I : Color the triangles using CPT
L : Pen to draw the underlying triangulation (default none)
N : Do not clip contours
Q : Minimum contour length
``'[p|t]'``
S : Skip input points outside region
``'[p|t]'``
levels : str
Contour file or level(s)
D : str
Dump contour coordinates
E : str
Network information
label_placement : str
Placement of labels
I : bool
Color the triangles using CPT
triangular_mesh_pen : str
Pen to draw the underlying triangulation (default none)
N : bool
Do not clip contours
Q : float or str
Do not draw contours with less than cut number of points.
``'[cut[unit]][+z]'``
skip : bool or str
Skip input points outside region ``'[p|t]'``
{W}
X : Origin shift x
Y : Origin shift y
"""
kwargs = self._preprocess(**kwargs)
Expand All @@ -623,7 +632,15 @@ def contour(self, x=None, y=None, z=None, data=None, **kwargs):
lib.call_module("contour", arg_str)

@fmt_docstring
@use_alias(R="region", J="projection", B="frame")
@use_alias(
R="region",
J="projection",
B="frame",
L="map_scale",
Td="rose",
Tm="compass",
U="timestamp",
)
@kwargs_to_strings(R="sequence")
def basemap(self, **kwargs):
"""
Expand All @@ -634,7 +651,8 @@ def basemap(self, **kwargs):
[optionally] gridlines. A simple map scale or directional rose may also
be plotted.
At least one of the options *B*, *L*, or *T* must be specified.
At least one of the options *frame*, *map_scale*, *rose* or *compass*
must be specified.
Full option list at :gmt-docs:`basemap.html`
Expand All @@ -645,13 +663,13 @@ def basemap(self, **kwargs):
{J}
{R}
{B}
L : str
map_scale : str
``'[g|j|J|n|x]refpoint'``
Draws a simple map scale centered on the reference point specified.
Td : str
rose : str
Draws a map directional rose on the map at the location defined by
the reference and anchor points.
Tm : str
compass : str
Draws a map magnetic rose on the map at the location defined by the
reference and anchor points
{U}
Expand All @@ -664,7 +682,7 @@ def basemap(self, **kwargs):
lib.call_module("basemap", build_arg_string(kwargs))

@fmt_docstring
@use_alias(R="region", J="projection")
@use_alias(R="region", J="projection", U="timestamp", D="position", F="box")
@kwargs_to_strings(R="sequence")
def logo(self, **kwargs):
"""
Expand All @@ -683,10 +701,10 @@ def logo(self, **kwargs):
----------
{J}
{R}
D : str
position : str
``'[g|j|J|n|x]refpoint+wwidth[+jjustify][+odx[/dy]]'``.
Sets reference point on the map for the image.
F : bool or str
box : bool or str
Without further options, draws a rectangular border around the
GMT logo.
{U}
Expand All @@ -699,7 +717,7 @@ def logo(self, **kwargs):
lib.call_module("logo", build_arg_string(kwargs))

@fmt_docstring
@use_alias(R="region", J="projection")
@use_alias(R="region", J="projection", D="position", F="box", M="monochrome")
@kwargs_to_strings(R="sequence")
def image(self, imagefile, **kwargs):
"""
Expand All @@ -714,17 +732,23 @@ def image(self, imagefile, **kwargs):
Parameters
----------
imagefile : str
This must be an Encapsulated PostScript (EPS) file or a raster
image. An EPS file must contain an appropriate BoundingBox. A
raster file can have a depth of 1, 8, 24, or 32 bits and is read
via GDAL. Note: If GDAL was not configured during GMT installation
then only EPS files are supported.
{J}
{R}
D: str
position : str
``'[g|j|J|n|x]refpoint+rdpi+w[-]width[/height][+jjustify]
[+nnx[/ny]][+odx[/dy]]'`` Sets reference point on the map for the
image.
F : bool or str
box : bool or str
``'[+cclearances][+gfill][+i[[gap/]pen]][+p[pen]][+r[radius]]
[+s[[dx/dy/][shade]]]'`` Without further options, draws a
rectangular border around the image using **MAP_FRAME_PEN**.
M : bool
monochrome : bool
Convert color image to monochrome grayshades using the (television)
YIQ-transformation.
"""
Expand Down Expand Up @@ -758,12 +782,12 @@ def legend(self, spec=None, position="JTR+jTR+o0.2c", box="+gwhite+p1p", **kwarg
specification file.
{J}
{R}
position (D) : str
position : str
``'[g|j|J|n|x]refpoint+wwidth[/height][+jjustify][+lspacing]
[+odx[/dy]]'`` Defines the reference point on the map for the
legend. By default, uses 'JTR+jTR+o0.2c' which places the legend at
the top-right corner inside the map frame, with a 0.2 cm offset.
box (F) : bool or str
box : bool or str
``'[+cclearances][+gfill][+i[[gap/]pen]][+p[pen]][+r[radius]]
[+s[[dx/dy/][shade]]]'`` Without further options, draws a
rectangular border around the legend using **MAP_FRAME_PEN**. By
Expand Down Expand Up @@ -826,12 +850,12 @@ def text(
textfiles : str or list
A text data file name, or a list of filenames containing 1 or more
records with (x, y[, font, angle, justify], text).
x, y : float or 1d arrays
x/y : float or 1d arrays
The x and y coordinates, or an array of x and y coordinates to plot
the text
text : str or 1d array
The text string, or an array of strings to plot on the figure
angle: int/float or bool
angle: int, float or bool
Set the angle measured in degrees counter-clockwise from
horizontal. E.g. 30 sets the text at 30 degrees. If no angle is
given then the input textfile(s) must have this as a column.
Expand Down
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