Skip to content

Commit

Permalink
Add load_venus_relief to load Venus relief dataset in various resolut…
Browse files Browse the repository at this point in the history
…ions
  • Loading branch information
seisman committed Dec 21, 2023
1 parent 06ae818 commit f1aab33
Show file tree
Hide file tree
Showing 6 changed files with 183 additions and 0 deletions.
1 change: 1 addition & 0 deletions doc/api/index.rst
Original file line number Diff line number Diff line change
Expand Up @@ -226,6 +226,7 @@ and store them in GMT's user data directory.
datasets.load_earth_mask
datasets.load_earth_relief
datasets.load_earth_vertical_gravity_gradient
datasets.load_venus_relief
datasets.load_sample_data

In addition, there is also a special function to load XYZ tile maps via
Expand Down
1 change: 1 addition & 0 deletions pygmt/datasets/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,3 +15,4 @@
)
from pygmt.datasets.samples import list_sample_data, load_sample_data
from pygmt.datasets.tile_map import load_tile_map
from pygmt.datasets.venus_relief import load_venus_relief
20 changes: 20 additions & 0 deletions pygmt/datasets/load_remote_dataset.py
Original file line number Diff line number Diff line change
Expand Up @@ -229,6 +229,26 @@ class GMTRemoteDataset(NamedTuple):
"03m": Resolution(["gridline"], True),
},
),
"venus_relief": GMTRemoteDataset(
title="Venus relief",
name="venus relief",
long_name="Venus relief",
units="meters",
extra_attributes={},
resolutions={
"01d": Resolution(["gridline", "pixel"], False),
"30m": Resolution(["gridline", "pixel"], False),
"20m": Resolution(["gridline", "pixel"], False),
"15m": Resolution(["gridline", "pixel"], False),
"10m": Resolution(["gridline", "pixel"], False),
"06m": Resolution(["gridline", "pixel"], False),
"05m": Resolution(["gridline", "pixel"], True),
"04m": Resolution(["gridline", "pixel"], True),
"03m": Resolution(["gridline", "pixel"], True),
"02m": Resolution(["gridline", "pixel"], True),
"01m": Resolution(["gridline"], True),
},
),
}


Expand Down
107 changes: 107 additions & 0 deletions pygmt/datasets/venus_relief.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,107 @@
"""
Function to download the Venus relief dataset from the GMT data server, and
load as :class:`xarray.DataArray`.
The grids are available in various resolutions.
"""
from typing import Literal

from pygmt.datasets.load_remote_dataset import _load_remote_dataset
from pygmt.helpers import kwargs_to_strings

__doctest_skip__ = ["load_venus_relief"]


@kwargs_to_strings(region="sequence")
def load_venus_relief(
resolution="01d",
region=None,
registration: Literal["gridline", "pixel"] = "gridline",
):
r"""
Load the Venus relief dataset in various resolutions.
.. figure:: https://www.generic-mapping-tools.org/remote-datasets/_images/GMT_venus_relief.jpg
:width: 80%
:align: center
Venus relief dataset.
The grids are downloaded to a user data directory
(usually ``~/.gmt/server/venus/venus_relief/``) the first time you invoke
this function. Afterwards, it will load the grid from the data directory.
So you'll need an internet connection the first time around.
These grids can also be accessed by passing in the file name
**@venus_relief**\_\ *res*\[_\ *reg*] to any grid processing function or
plotting method. *res* is the grid resolution (see below), and *reg* is the
grid registration type (**p** for pixel registration or **g** for gridline
registration).
The default color palette table (CPT) for this dataset is
*@venus_relief.cpt*. It's implicitly used when passing in the file name of
the dataset to any grid plotting method if no CPT is explicitly specified.
When the dataset is loaded and plotted as an :class:`xarray.DataArray`
object, the default CPT is ignored, and GMT's default CPT (*turbo*) is
used. To use the dataset-specific CPT, you need to explicitly set
``cmap="@venus_relief.cpt"``.
Refer to :gmt-datasets:`venus-relief.html` for more details about available
datasets, including version information and references.
Parameters
----------
resolution : str
The grid resolution. The suffix ``d``, ``m`` and ``s`` stand for
arc-degrees, arc-minutes and arc-seconds. It can be ``"01d"``,
``"30m"``, ``"20m"``, ``"15m"``, ``"10m"``, ``"06m"``, ``"05m"``,
``"04m"``, ``"03m"``, ``"02m"``, and ``"01m"``.
region : str or list
The subregion of the grid to load, in the form of a list
[*xmin*, *xmax*, *ymin*, *ymax*] or a string *xmin/xmax/ymin/ymax*.
Required for grids with resolutions higher than 5 arc-minutes
(i.e., ``"05m"``).
registration
Grid registration type. Either ``"pixel"`` for pixel registration or
``"gridline"`` for gridline registration.
Returns
-------
grid : :class:`xarray.DataArray`
The Venus relief grid. Coordinates are latitude and longitude in
degrees. Relief is in meters.
Note
----
The registration and coordinate system type of the returned
:class:`xarray.DataArray` grid can be accessed via the GMT accessors
(i.e., ``grid.gmt.registration`` and ``grid.gmt.gtype`` respectively).
However, these properties may be lost after specific grid operations (such
as slicing) and will need to be manually set before passing the grid to any
PyGMT data processing or plotting functions. Refer to
:class:`pygmt.GMTDataArrayAccessor` for detailed explanations and
workarounds.
Examples
--------
>>> from pygmt.datasets import load_venus_relief
>>> # load the default grid (gridline-registered 1 arc-degree grid)
>>> grid = load_venus_relief()
>>> # load the 30 arc-minutes grid with "gridline" registration
>>> grid = load_venus_relief(resolution="30m", registration="gridline")
>>> # load high-resolution (5 arc-minutes) grid for a specific region
>>> grid = load_venus_relief(
... resolution="05m",
... region=[120, 160, 30, 60],
... registration="gridline",
... )
"""
grid = _load_remote_dataset(
dataset_name="venus_relief",
dataset_prefix="venus_relief_",
resolution=resolution,
region=region,
registration=registration,
)
return grid
3 changes: 3 additions & 0 deletions pygmt/helpers/testing.py
Original file line number Diff line number Diff line change
Expand Up @@ -200,6 +200,9 @@ def download_test_data():
# Earth WDMAM grids
"@earth_wdmam_01d_g",
"@S90E000.earth_wdmam_03m_g.nc", # Specific grid for 03m test
# Venus relief grids
"@venus_relief_01d_g",
"@N00W030.venus_relief_01m_g.nc", # Specific grid for 01m test
# Other cache files
"@capitals.gmt",
"@earth_relief_20m_holes.grd",
Expand Down
51 changes: 51 additions & 0 deletions pygmt/tests/test_datasets_venus_relief.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,51 @@
"""
Test basic functionality for loading Venus relief datasets.
"""
import numpy as np
import numpy.testing as npt
from pygmt.datasets import load_venus_relief


def test_mars_relief_01d():
"""
Test some properties of the Venus relief 01d data.
"""
data = load_venus_relief(resolution="01d")
assert data.name == "mars relief"
assert data.attrs["units"] == "meters"
assert data.attrs["long_name"] == "Venus relief"
assert data.shape == (181, 361)
assert data.gmt.registration == 0
npt.assert_allclose(data.lat, np.arange(-90, 91, 1))
npt.assert_allclose(data.lon, np.arange(-180, 181, 1))
npt.assert_allclose(data.min(), -7421.0, atol=0.5)
npt.assert_allclose(data.max(), 19587.5, atol=0.5)


def test_mars_relief_01d_with_region():
"""
Test loading low-resolution Venus relief with 'region'.
"""
data = load_venus_relief(resolution="01d", region=[-10, 10, -5, 5])
assert data.shape == (11, 21)
assert data.gmt.registration == 0
npt.assert_allclose(data.lat, np.arange(-5, 6, 1))
npt.assert_allclose(data.lon, np.arange(-10, 11, 1))
npt.assert_allclose(data.min(), -2502.0, atol=0.5)
npt.assert_allclose(data.max(), -135.5, atol=0.5)


def test_mars_relief_01m_default_registration():
"""
Test that the grid returned by default for the 1 arc-minute resolution has
a "gridline" registration.
"""
data = load_venus_relief(resolution="01m", region=[-10, -9, 3, 5])
assert data.shape == (121, 61)
assert data.gmt.registration == 0
assert data.coords["lat"].data.min() == 3.0
assert data.coords["lat"].data.max() == 5.0
assert data.coords["lon"].data.min() == -10.0
assert data.coords["lon"].data.max() == -9.0
npt.assert_allclose(data.min(), -3374.0, atol=0.5)
npt.assert_allclose(data.max(), -1181.0, atol=0.5)

0 comments on commit f1aab33

Please sign in to comment.