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Merge branch 'hdf5_1_8_21' of https://bitbucket.hdfgroup.org/scm/~lrk…
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…nox/hdf5_lrk into 1.8/master
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lrknox committed Jun 7, 2018
2 parents b8c6b68 + deab7b2 commit 664186b
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Showing 308 changed files with 36,335 additions and 44,725 deletions.
10 changes: 5 additions & 5 deletions CMakeInstallation.cmake
View file
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
if (HDF5_EXPORTED_TARGETS)
install (
EXPORT ${HDF5_EXPORTED_TARGETS}
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}/hdf5
FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
NAMESPACE ${HDF5_PACKAGE}::
COMPONENT configinstall
Expand Down Expand Up @@ -84,7 +84,7 @@ set (CURRENT_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}" )
configure_package_config_file (
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
"${HDF5_BINARY_DIR}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}/hdf5"
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
INSTALL_PREFIX "${CMAKE_CURRENT_BINARY_DIR}"
)
Expand All @@ -98,14 +98,14 @@ set (CURRENT_BUILD_DIR "${CMAKE_INSTALL_PREFIX}" )
configure_package_config_file (
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
"${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}/hdf5"
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
)

if (NOT HDF5_EXTERNALLY_CONFIGURED)
install (
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}/hdf5
COMPONENT configinstall
)
endif ()
Expand All @@ -120,7 +120,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
)
install (
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
DESTINATION ${HDF5_INSTALL_CMAKE_DIR}/hdf5
COMPONENT configinstall
)
endif ()
Expand Down
147 changes: 42 additions & 105 deletions CMakeLists.txt
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
cmake_minimum_required (VERSION 3.2.2)
cmake_minimum_required (VERSION 3.10)
PROJECT (HDF5 C CXX)

#-----------------------------------------------------------------------------
Expand Down Expand Up @@ -183,44 +183,6 @@ set (HDF5_TOOLS_SRC_DIR ${HDF5_SOURCE_DIR}/tools)
set (HDF5_PERFORM_SRC_DIR ${HDF5_SOURCE_DIR}/tools/perform)
set (HDF5_F90_SRC_DIR ${HDF5_SOURCE_DIR}/fortran)

if (APPLE)
option (HDF5_BUILD_FRAMEWORKS "TRUE to build as frameworks libraries, FALSE to build according to BUILD_SHARED_LIBS" FALSE)
endif ()

if (NOT HDF5_INSTALL_BIN_DIR)
set (HDF5_INSTALL_BIN_DIR bin)
endif ()
if (NOT HDF5_INSTALL_LIB_DIR)
if (APPLE)
set (HDF5_INSTALL_FMWK_DIR ${CMAKE_INSTALL_FRAMEWORK_PREFIX})
endif ()
set (HDF5_INSTALL_LIB_DIR lib)
endif ()
if (NOT HDF5_INSTALL_INCLUDE_DIR)
set (HDF5_INSTALL_INCLUDE_DIR include)
endif ()
if (NOT HDF5_INSTALL_DATA_DIR)
if (NOT WIN32)
if (APPLE)
if (HDF5_BUILD_FRAMEWORKS)
set (HDF5_INSTALL_EXTRA_DIR ../SharedSupport)
else ()
set (HDF5_INSTALL_EXTRA_DIR share)
endif ()
set (HDF5_INSTALL_FWRK_DIR ${CMAKE_INSTALL_FRAMEWORK_PREFIX})
endif ()
set (HDF5_INSTALL_DATA_DIR share)
set (HDF5_INSTALL_CMAKE_DIR share/cmake)
else ()
set (HDF5_INSTALL_DATA_DIR ".")
set (HDF5_INSTALL_CMAKE_DIR cmake)
endif ()
endif ()

if (DEFINED ADDITIONAL_CMAKE_PREFIX_PATH AND EXISTS "${ADDITIONAL_CMAKE_PREFIX_PATH}")
set (CMAKE_PREFIX_PATH ${ADDITIONAL_CMAKE_PREFIX_PATH} ${CMAKE_PREFIX_PATH})
endif ()

#-----------------------------------------------------------------------------
# parse the full version number from H5public.h and include in H5_VERS_INFO
#-----------------------------------------------------------------------------
Expand All @@ -240,13 +202,13 @@ string (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z._]*)
#-----------------------------------------------------------------------------
file (READ ${HDF5_SOURCE_DIR}/config/lt_vers.am _lt_vers_am_contents)
string (REGEX REPLACE ".*LT_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_SOVERS_INTERFACE ${_lt_vers_am_contents})
"\\1" H5_LIB_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_SOVERS_MINOR ${_lt_vers_am_contents})
"\\1" H5_LIB_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_SOVERS_MAJOR ${H5_SOVERS_INTERFACE}-${H5_SOVERS_RELEASE})
message (STATUS "SOVERSION: ${H5_SOVERS_MAJOR}.${H5_SOVERS_RELEASE}.${H5_SOVERS_MINOR}")
"\\1" H5_LIB_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_LIB_SOVERS_MAJOR ${H5_LIB_SOVERS_INTERFACE}-${H5_LIB_SOVERS_RELEASE})
message (STATUS "SOVERSION: ${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
string (REGEX REPLACE ".*LT_TOOLS_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_TOOLS_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_TOOLS_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
Expand Down Expand Up @@ -309,13 +271,20 @@ if (NOT "${H5_VERS_SUBRELEASE}" STREQUAL "")
else ()
set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
endif ()
set (HDF5_PACKAGE_SOVERSION "${H5_SOVERS_MAJOR}.${H5_SOVERS_RELEASE}.${H5_SOVERS_MINOR}")
set (HDF5_LIB_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_TOOLS_PACKAGE_SOVERSION "${H5_TOOLS_SOVERS_MAJOR}.${H5_TOOLS_SOVERS_RELEASE}.${H5_TOOLS_SOVERS_MINOR}")
set (HDF5_TOOLS_PACKAGE_SOVERSION_MAJOR "${H5_TOOLS_SOVERS_MAJOR}")
set (HDF5_LIB_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
set (HDF5_CXX_PACKAGE_SOVERSION "${H5_CXX_SOVERS_MAJOR}.${H5_CXX_SOVERS_RELEASE}.${H5_CXX_SOVERS_MINOR}")
set (HDF5_CXX_PACKAGE_SOVERSION_MAJOR "${H5_CXX_SOVERS_MAJOR}")
set (HDF5_F_PACKAGE_SOVERSION "${H5_F_SOVERS_MAJOR}.${H5_F_SOVERS_RELEASE}.${H5_F_SOVERS_MINOR}")
set (HDF5_F_PACKAGE_SOVERSION_MAJOR "${H5_F_SOVERS_MAJOR}")
set (HDF5_HL_PACKAGE_SOVERSION "${H5_HL_SOVERS_MAJOR}.${H5_HL_SOVERS_RELEASE}.${H5_HL_SOVERS_MINOR}")
set (HDF5_HL_PACKAGE_SOVERSION_MAJOR "${H5_HL_SOVERS_MAJOR}")
set (HDF5_HL_CXX_PACKAGE_SOVERSION "${H5_HL_CXX_SOVERS_MAJOR}.${H5_HL_CXX_SOVERS_RELEASE}.${H5_HL_CXX_SOVERS_MINOR}")
set (HDF5_HL_CXX_PACKAGE_SOVERSION_MAJOR "${H5_HL_CXX_SOVERS_MAJOR}")
set (HDF5_HL_F_PACKAGE_SOVERSION "${H5_HL_F_SOVERS_MAJOR}.${H5_HL_F_SOVERS_RELEASE}.${H5_HL_F_SOVERS_MINOR}")
set (HDF5_HL_F_PACKAGE_SOVERSION_MAJOR "${H5_HL_F_SOVERS_MAJOR}")
set (HDF5_PACKAGE_STRING "${HDF5_PACKAGE_NAME} ${HDF5_PACKAGE_VERSION_STRING}")
set (HDF5_PACKAGE_TARNAME "${HDF5_PACKAGE}${HDF_PACKAGE_EXT}")
set (HDF5_PACKAGE_URL "http://www.hdfgroup.org")
Expand All @@ -325,44 +294,15 @@ set (HDF5_PACKAGE_BUGREPORT "help@hdfgroup.org")
# Include some macros for reusable code
#-----------------------------------------------------------------------------
include (${HDF_RESOURCES_EXT_DIR}/HDFMacros.cmake)

HDF_DIR_PATHS(${HDF5_PACKAGE_NAME})

include (${HDF_RESOURCES_EXT_DIR}/HDFLibMacros.cmake)
include (${HDF_RESOURCES_DIR}/HDF5Macros.cmake)

#-----------------------------------------------------------------------------
# Setup output Directories
#-----------------------------------------------------------------------------
if (NOT HDF5_EXTERNALLY_CONFIGURED)
set (CMAKE_RUNTIME_OUTPUT_DIRECTORY
${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all Executables."
)
set (CMAKE_LIBRARY_OUTPUT_DIRECTORY
${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all Libraries"
)
set (CMAKE_ARCHIVE_OUTPUT_DIRECTORY
${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all static libraries."
)
set (CMAKE_Fortran_MODULE_DIRECTORY
${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all fortran modules."
)
if (WIN32)
set (CMAKE_TEST_OUTPUT_DIRECTORY ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE})
set (CMAKE_PDB_OUTPUT_DIRECTORY
${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all pdb files."
)
else ()
set (CMAKE_TEST_OUTPUT_DIRECTORY ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
endif ()
else ()
# if we are externally configured, but the project uses old cmake scripts
# this may not be set and utilities like H5detect will fail
if (NOT CMAKE_RUNTIME_OUTPUT_DIRECTORY)
set (CMAKE_RUNTIME_OUTPUT_DIRECTORY ${EXECUTABLE_OUTPUT_PATH})
endif ()
endif ()

#-----------------------------------------------------------------------------
# Targets built within this project are exported at Install time for use
# by other projects using FindHDF5.
# by other projects.
#-----------------------------------------------------------------------------
if (NOT HDF5_EXPORTED_TARGETS)
set (HDF5_EXPORTED_TARGETS "hdf5-targets")
Expand Down Expand Up @@ -462,11 +402,9 @@ endif ()
set (EXE_EXT "")
if (WIN32)
set (EXE_EXT ".exe")
if (NOT CYGWIN)
add_definitions (-D_BIND_TO_CURRENT_VCLIBS_VERSION=1)
add_definitions (-D_CRT_SECURE_NO_WARNINGS)
add_definitions (-D_CONSOLE)
endif ()
add_definitions (-D_BIND_TO_CURRENT_VCLIBS_VERSION=1)
add_definitions (-D_CRT_SECURE_NO_WARNINGS)
add_definitions (-D_CONSOLE)
endif ()

if (MSVC)
Expand All @@ -493,7 +431,7 @@ option (HDF5_BUILD_GENERATORS "Build Test Generators" OFF)
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_TRACE "Enable API tracing capability" OFF)
mark_as_advanced (HDF5_ENABLE_TRACE)
if (CMAKE_BUILD_TYPE MATCHES Debug)
if (${HDF_CFG_NAME} MATCHES "Debug")
add_definitions (-DDEBUG)
# Enable tracing of the API
if (HDF5_ENABLE_TRACE)
Expand All @@ -515,9 +453,13 @@ endif ()
#-----------------------------------------------------------------------------
# Option to embed library info into executables
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_EMBEDDED_LIBINFO "embed library info into executables" ON)
if (HDF5_ENABLE_EMBEDDED_LIBINFO)
set (H5_HAVE_EMBEDDED_LIBINFO 1)
if (CMAKE_SYSTEM_NAME STREQUAL "Emscripten")
set (H5_HAVE_EMBEDDED_LIBINFO 0)
else ()
option (HDF5_ENABLE_EMBEDDED_LIBINFO "embed library info into executables" ON)
if (HDF5_ENABLE_EMBEDDED_LIBINFO)
set (H5_HAVE_EMBEDDED_LIBINFO 1)
endif ()
endif ()

include (${HDF_RESOURCES_DIR}/HDFCompilerFlags.cmake)
Expand All @@ -542,6 +484,7 @@ if (HDF5_ENABLE_PARALLEL)
# Used by Fortran + MPI
CHECK_SYMBOL_EXISTS (MPI_Comm_c2f "${MPI_C_INCLUDE_DIRS}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Comm)
CHECK_SYMBOL_EXISTS (MPI_Info_c2f "${MPI_C_INCLUDE_DIRS}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Info)
INCLUDE_DIRECTORIES (${MPI_C_INCLUDE_DIRS})
else ()
message (STATUS "Parallel libraries not found")
endif ()
Expand All @@ -550,7 +493,6 @@ endif ()
# Parallel IO usage requires MPI to be Linked and Included
if (H5_HAVE_PARALLEL)
set (LINK_LIBS ${LINK_LIBS} ${MPI_C_LIBRARIES})
set (LINK_SHARED_LIBS ${LINK_SHARED_LIBS} ${MPI_C_LIBRARIES})
if (MPI_C_LINK_FLAGS)
set (CMAKE_EXE_LINKER_FLAGS "${MPI_C_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS}")
endif ()
Expand All @@ -575,8 +517,6 @@ include (UserMacros.cmake)
#-----------------------------------------------------------------------------
# Include filter (zlib, szip, etc.) macros
#-----------------------------------------------------------------------------
set (LINK_COMP_LIBS)
set (LINK_COMP_SHARED_LIBS)
include (CMakeFilters.cmake)

#-----------------------------------------------------------------------------
Expand Down Expand Up @@ -649,17 +589,17 @@ endif ()
#-----------------------------------------------------------------------------
# Add the HDF5 Library Target to the build
#-----------------------------------------------------------------------------
add_subdirectory (${HDF5_SOURCE_DIR}/src ${PROJECT_BINARY_DIR}/src)
add_subdirectory (src)

if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ")
if (ZLIB_FOUND AND ZLIB_USE_EXTERNAL)
ADD_DEPENDENCIES (${HDF5_LIB_TARGET} ZLIB)
add_dependencies (${HDF5_LIB_TARGET} ZLIB)
if (BUILD_SHARED_LIBS)
add_dependencies (${HDF5_LIBSH_TARGET} ZLIB)
endif ()
endif ()
if (SZIP_FOUND AND SZIP_USE_EXTERNAL)
ADD_DEPENDENCIES (${HDF5_LIB_TARGET} SZIP)
add_dependencies (${HDF5_LIB_TARGET} SZIP)
if (BUILD_SHARED_LIBS)
add_dependencies (${HDF5_LIBSH_TARGET} SZIP)
endif ()
Expand Down Expand Up @@ -697,12 +637,11 @@ if (BUILD_TESTING)

if (NOT HDF5_EXTERNALLY_CONFIGURED)
if (EXISTS "${HDF5_SOURCE_DIR}/test" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/test")
add_subdirectory (${HDF5_SOURCE_DIR}/tools/lib ${PROJECT_BINARY_DIR}/tools/lib)
add_subdirectory (${HDF5_SOURCE_DIR}/test ${PROJECT_BINARY_DIR}/test)
add_subdirectory (test)
endif ()
if (H5_HAVE_PARALLEL)
if (EXISTS "${HDF5_SOURCE_DIR}/testpar" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/testpar")
add_subdirectory (${HDF5_SOURCE_DIR}/testpar ${PROJECT_BINARY_DIR}/testpar)
add_subdirectory (testpar)
endif ()
endif ()
endif ()
Expand All @@ -714,7 +653,7 @@ endif ()
if (EXISTS "${HDF5_SOURCE_DIR}/tools" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/tools")
option (HDF5_BUILD_TOOLS "Build HDF5 Tools" ON)
if (HDF5_BUILD_TOOLS)
add_subdirectory (${HDF5_SOURCE_DIR}/tools ${PROJECT_BINARY_DIR}/tools)
add_subdirectory (tools)
endif ()
endif ()

Expand All @@ -724,7 +663,7 @@ endif ()
if (EXISTS "${HDF5_SOURCE_DIR}/examples" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/examples")
option (HDF5_BUILD_EXAMPLES "Build HDF5 Library Examples" ON)
if (HDF5_BUILD_EXAMPLES)
add_subdirectory (${HDF5_SOURCE_DIR}/examples ${PROJECT_BINARY_DIR}/examples)
add_subdirectory (examples)
endif ()
endif ()

Expand All @@ -735,7 +674,7 @@ if (EXISTS "${HDF5_SOURCE_DIR}/hl" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl")
option (HDF5_BUILD_HL_LIB "Build HIGH Level HDF5 Library" ON)
if (HDF5_BUILD_HL_LIB)
set (H5_INCLUDE_HL 1)
add_subdirectory (${HDF5_SOURCE_DIR}/hl ${PROJECT_BINARY_DIR}/hl)
add_subdirectory (hl)
endif ()
endif ()

Expand Down Expand Up @@ -764,7 +703,6 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for
include (${HDF_RESOURCES_EXT_DIR}/HDFUseFortran.cmake)

set (LINK_Fortran_LIBS ${LINK_LIBS})
set (LINK_Fortran_SHARED_LIBS ${LINK_SHARED_LIBS})

if (HDF5_ENABLE_F2003)
if (NOT FORTRAN_HAVE_ISO_C_BINDING)
Expand All @@ -775,17 +713,16 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for
# Parallel IO usage requires MPI to be Linked and Included
if (H5_HAVE_PARALLEL)
set (LINK_Fortran_LIBS ${LINK_Fortran_LIBS} ${MPI_Fortran_LIBRARIES})
set (LINK_Fortran_SHARED_LIBS ${LINK_Fortran_SHARED_LIBS} ${MPI_Fortran_LIBRARIES})
if (MPI_Fortran_LINK_FLAGS)
set (CMAKE_Fortran_EXE_LINKER_FLAGS "${MPI_Fortran_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS}")
endif ()
endif ()

add_subdirectory (${HDF5_SOURCE_DIR}/fortran ${PROJECT_BINARY_DIR}/fortran)
add_subdirectory (fortran)
if (HDF5_BUILD_HL_LIB)
if (EXISTS "${HDF5_SOURCE_DIR}/hl/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl/fortran")
#-- Build the High Level Fortran source codes
add_subdirectory (${HDF5_SOURCE_DIR}/hl/fortran ${PROJECT_BINARY_DIR}/hl/fortran)
add_subdirectory (hl/fortran)
endif ()
endif ()
endif ()
Expand All @@ -808,11 +745,11 @@ if (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++")
if (CMAKE_NO_STD_NAMESPACE)
set (H5_NO_STD 1)
endif ()
add_subdirectory (${HDF5_SOURCE_DIR}/c++ ${PROJECT_BINARY_DIR}/c++)
add_subdirectory (c++)
if (HDF5_BUILD_HL_LIB)
if (EXISTS "${HDF5_SOURCE_DIR}/hl/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl/c++")
#-- Build the High Level Fortran source codes
add_subdirectory (${HDF5_SOURCE_DIR}/hl/c++ ${PROJECT_BINARY_DIR}/hl/c++)
add_subdirectory (hl/c++)
endif ()
endif ()
endif ()
Expand Down
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