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H5Lget_info aborted when ID is a datatype ID #4705

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bmribler opened this issue Aug 12, 2024 · 0 comments
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H5Lget_info aborted when ID is a datatype ID #4705

bmribler opened this issue Aug 12, 2024 · 0 comments
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Component - C Library Core C library issues (usually in the src directory) Confirmed Priority - 1. High 🔼 These are important issues that should be resolved in the next release Type - Bug Please report security issues to help@hdfgroup.org instead of creating an issue on GitHub
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@bmribler
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bmribler commented Aug 12, 2024

The documentation for H5Lget_info says:
"The identifier may be that of a file, group, dataset, named datatype, or attribute."

However, a user's program generated a segfault (previously) or aborted when the ID passed into H5Lget_info was a datatype ID as below:

herr_t status = H5Lget_info(dtype, name.c_str(), &linfo, H5P_DEFAULT);

Original issue: #4644

The problem was confirmed on Ubuntu 22.04, with a datatype ID either from H5D or H5R API. h5treferences.zip contains the input file.

h5treferences.zip

Update
From NF: H5Lget_info2() needs to call H5VL_vol_object() instead of H5I_object(). We should also double check that we don't make that mistake anywhere else. (GH-4730)

@bmribler bmribler added Priority - 1. High 🔼 These are important issues that should be resolved in the next release Component - C Library Core C library issues (usually in the src directory) Confirmed labels Aug 12, 2024
@bmribler bmribler changed the title H5Lget_info segfault when ID is not a location ID H5Lget_info aborted when ID is a datatype ID Aug 14, 2024
@bmribler bmribler assigned bmribler and unassigned fortnern Aug 14, 2024
@derobins derobins added the Type - Bug Please report security issues to help@hdfgroup.org instead of creating an issue on GitHub label Aug 15, 2024
@derobins derobins added this to the 1.14.5 milestone Aug 15, 2024
bmribler added a commit to bmribler/hdf5_bmr23 that referenced this issue Aug 19, 2024
H5Lget_info2() called H5I_object() instead of H5VL_vol_object() crashed
user application.
This is a wide-spread issue (HDFGroupGH-4730) but this PR only addresses HDFGroupGH-4705.
lrknox pushed a commit that referenced this issue Aug 21, 2024
* Fix incorrect VOL vs. non-VOL calls

H5Lget_info2() called H5I_object() instead of H5VL_vol_object() crashed
user application.
This is a wide-spread issue (GH-4730) but this PR only addresses GH-4705.

* Remove an incorrect change
lrknox pushed a commit to lrknox/hdf5 that referenced this issue Aug 21, 2024
* Fix incorrect VOL vs. non-VOL calls

H5Lget_info2() called H5I_object() instead of H5VL_vol_object() crashed
user application.
This is a wide-spread issue (HDFGroupGH-4730) but this PR only addresses HDFGroupGH-4705.

* Remove an incorrect change
lrknox added a commit that referenced this issue Aug 22, 2024
* Warning fix (#4682)

* warning fix

* warning fix

* CMake link line needs to use new HDF5_ENABLE_THREADS (#4685)

* Correct the properties for using THREADS library (#4690)

* Bump the github-actions group with 5 updates (#4688)

Bumps the github-actions group with 5 updates:

| Package | From | To |
| --- | --- | --- |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `4.1.7` | `4.1.8` |
| [DoozyX/clang-format-lint-action](https://github.com/doozyx/clang-format-lint-action) | `0.13` | `0.17` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `2.0.6` | `2.0.8` |
| [ossf/scorecard-action](https://github.com/ossf/scorecard-action) | `2.3.3` | `2.4.0` |
| [github/codeql-action](https://github.com/github/codeql-action) | `3.25.11` | `3.25.15` |


Updates `actions/download-artifact` from 4.1.7 to 4.1.8
- [Release notes](https://github.com/actions/download-artifact/releases)
- [Commits](actions/download-artifact@65a9edc...fa0a91b)

Updates `DoozyX/clang-format-lint-action` from 0.13 to 0.17
- [Release notes](https://github.com/doozyx/clang-format-lint-action/releases)
- [Commits](DoozyX/clang-format-lint-action@v0.13...v0.17)

Updates `softprops/action-gh-release` from 2.0.6 to 2.0.8
- [Release notes](https://github.com/softprops/action-gh-release/releases)
- [Changelog](https://github.com/softprops/action-gh-release/blob/master/CHANGELOG.md)
- [Commits](softprops/action-gh-release@a74c6b7...c062e08)

Updates `ossf/scorecard-action` from 2.3.3 to 2.4.0
- [Release notes](https://github.com/ossf/scorecard-action/releases)
- [Changelog](https://github.com/ossf/scorecard-action/blob/main/RELEASE.md)
- [Commits](ossf/scorecard-action@dc50aa9...62b2cac)

Updates `github/codeql-action` from 3.25.11 to 3.25.15
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](github/codeql-action@b611370...afb54ba)

---
updated-dependencies:
- dependency-name: actions/download-artifact
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: DoozyX/clang-format-lint-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: softprops/action-gh-release
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: ossf/scorecard-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: github/codeql-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
...

* Fix segfault when closing datatype during failure in H5Topen2 (#4683)

* Rework Dynamic Analysis and sanitize testing (#4681)

* Ignore predetermined failing test and check pointer before use

* Rework Analysis process

* Remove another H5E_BEGIN/END_TRY within the library (#4675)

* Update logic for (deprecated) H5Gget_objinfo() call to eliminate H5E_BEGIN_TRY

* Handle case for '.' at the end of a path

* Drop H5E_BEGIN/END_TRY and just check the error return from H5I_clear_types() (#4694)

Original case that the change in commit 2dc738a
no longer applies.

* Add check of returned value from API calls. (#4702)

These were found while investigating GH-4672, but they were not related
to GH-4672.

* Add mac dmg binary and remove old macos-13 workflows (#4699)

* Add Windows SHLWAPI lib to public interface (#4701)

* Use local variable in btree2 and print value (#4679)

* Correct logic

* Technically, level 1 Express could skip tests

* Add windows signing (#4703)

* Add tests for H5R get name APIs (#4657)

Added functionality tests for the following APIs:
H5Rget_file_name
H5Rget_obj_name
H5Rget_attr_name

Also removed "+1" when returning a name length in H5R__get_attr_name().
The exter "+1" gave an incorrect value for the length of the referenced
object's attribute name.

Fixed GH-4447

* Fix Fortran test

The C API H5Rget_attr_name incorrectly added 1 to the length of the
referenced object's attribute name, so the Fortran API h5rget_attr_name_f
removed 1 from the returned value to accommodate the incorrectness.
This PR fixes H5Rget_attr_name so this workaround in h5rget_attr_name_f
is no longer needed.

* Add test H5Aget_name against H5Rget_attr_name

* Replace Visual Studio ???? with 2022 in MSI README file (#4709)

* Change logic for checking secrets exists (#4711)

* Change osx refs to macos (#4707)

* Replace alias \Code with \TText (#4714)

Fixed GH-2151

* Correct signing names and variables (#4713)

* Add secrets to release workflow (#4719)

* Add missing blosc2 info (#4717)

* Fix error return types in H5Rdeprec.c (#4722)

Copy-pasted code from elsewhere used FAIL instead of H5G_UNKNOWN
and H5I_INVALID_HID.

* Fix the release reference name (#4721)

* Test creating unseekable file (#4720)

* Cleanup up tests (#4724)

* Add arch name to dmg file name (#4732)

The binaries in snapshot dmg file do not work on x86_64.

* Fix snapshot CI failure by adding arch name to dmg file (#4734)

See also #4732.

* Fix incorrect VOL vs. non-VOL calls partially (#4733)

* Fix incorrect VOL vs. non-VOL calls

H5Lget_info2() called H5I_object() instead of H5VL_vol_object() crashed
user application.
This is a wide-spread issue (GH-4730) but this PR only addresses GH-4705.

* Remove an incorrect change

* Fix segfault in ROS3 credential parsing (#4736)

* Fix segfault in s3 credential parsing

* Fix AWS cred parsing when >1 profile provided

* Revert gh-pages action hash to fix daily build (#4735)

* Revert gh-pages action hash to fix daily build

See also #4734

* Revert gh-pages action hash to fix daily build

* Eliminate another use of H5E_clear_stack() within the library (#4726)

* Remove call to H5E_clear_stack()

Also clean up a bunch of error macros and the return value from H5B_valid()
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