fix typos in design doc #1066
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| pull_request: | |
| branches: [master] | |
| env: | |
| ROOT_DIR: ${{github.workspace}}/data | |
| jobs: | |
| build-and-test: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest] | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| build-method: ["manual", "docker"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| shell: bash | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install flake8 pytest | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Lint with flake8 | |
| shell: bash | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Install package | |
| shell: bash | |
| run: | | |
| pip install -e . | |
| - name: Run unit tests | |
| shell: bash | |
| run: | | |
| pytest | |
| - name: Start HSDS (Manual) | |
| shell: bash | |
| if: ${{matrix.build-method == 'manual'}} | |
| env: | |
| ADMIN_PASSWORD: admin | |
| ADMIN_USERNAME: admin | |
| USER_NAME: test_user1 | |
| USER_PASSWORD: test | |
| USER2_NAME: test_user2 | |
| USER2_PASSWORD: test | |
| HSDS_ENDPOINT: http://127.0.0.1:5101 | |
| BUCKET_NAME: hsdstest | |
| LOG_LEVEL: DEBUG | |
| run: | | |
| cp admin/config/groups.default admin/config/groups.txt | |
| cp admin/config/passwd.default admin/config/passwd.txt | |
| hsds --root_dir data --host localhost --port 5101 --password_file admin/config/passwd.txt --logfile hs.log --loglevel DEBUG --config_dir=admin/config --count=4 & | |
| - name: Start HSDS (Docker) | |
| shell: bash | |
| if: ${{matrix.build-method == 'docker' && matrix.os != 'windows-latest'}} | |
| env: | |
| ADMIN_PASSWORD: admin | |
| ADMIN_USERNAME: admin | |
| USER_NAME: test_user1 | |
| USER_PASSWORD: test | |
| USER2_NAME: test_user2 | |
| USER2_PASSWORD: test | |
| HSDS_ENDPOINT: http://127.0.0.1:5101 | |
| BUCKET_NAME: hsdstest | |
| LOG_LEVEL: DEBUG | |
| run: | | |
| cp admin/config/groups.default admin/config/groups.txt | |
| cp admin/config/passwd.default admin/config/passwd.txt | |
| ./build.sh --nolint | |
| ./runall.sh | |
| - name: Wait for node startup | |
| shell: bash | |
| run: | | |
| sleep 45 | |
| - name: Run HSDS tests | |
| if: ${{!(matrix.build-method == 'docker' && matrix.os == 'windows-latest')}} | |
| id: hsds-tests | |
| shell: bash | |
| env: | |
| ADMIN_PASSWORD: admin | |
| ADMIN_USERNAME: admin | |
| USER_NAME: test_user1 | |
| USER_PASSWORD: test | |
| USER2_NAME: test_user2 | |
| USER2_PASSWORD: test | |
| BUCKET_NAME: hsdstest | |
| LOG_LEVEL: DEBUG | |
| run: | | |
| python testall.py | |
| - name: Show HSDS Logs on Fail (Docker) | |
| # Only run if the whole workflow failed due to HSDS tests | |
| if: ${{failure() && steps.hsds-tests.outcome == 'failure' && (matrix.build-method == 'docker' && matrix.os != 'windows-latest')}} | |
| run: | | |
| docker logs hsds-sn-1 >&1 | |
| docker logs hsds-dn-1 >&1 | |
| docker logs hsds-dn-2 >&1 | |
| docker logs hsds-dn-3 >&1 | |
| docker logs hsds-dn-4 >&1 | |
| - name: Show HSDS Logs on Fail (Manual) | |
| # Only run if the whole workflow failed due to HSDS tests | |
| if: ${{failure() && steps.hsds-tests.outcome == 'failure' && (matrix.build-method == 'manual')}} | |
| run: | | |
| cat hs.log | |
| - name: Checkout h5pyd | |
| if: ${{ ( matrix.os != 'windows-latest' ) }} | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: HDFGroup/h5pyd | |
| path: ${{github.workspace}}/h5pyd | |
| - name: Install h5pyd | |
| if: ${{ ( matrix.os != 'windows-latest' ) }} | |
| working-directory: ${{github.workspace}}/h5pyd | |
| run: | | |
| pip install . -v | |
| - name: Create h5pyd test folder | |
| if: ${{ ( matrix.os != 'windows-latest' ) }} | |
| working-directory: ${{github.workspace}}/h5pyd | |
| env: | |
| HS_USERNAME: test_user1 | |
| HS_PASSWORD: test | |
| TEST2_USERNAME: test_user1 | |
| TEST2_PASSWORD: test | |
| H5PYD_TEST_FOLDER: /home/test_user1/h5pyd_tests/ | |
| HS_ENDPOINT: http://127.0.0.1:5101 | |
| run: | | |
| hstouch -e $HS_ENDPOINT /home/test_user1/h5pyd_tests/ | |
| - name: Run h5pyd tests | |
| if: ${{ ( matrix.os != 'windows-latest' ) }} | |
| working-directory: ${{github.workspace}}/h5pyd | |
| env: | |
| HS_USERNAME: test_user1 | |
| HS_PASSWORD: test | |
| TEST2_USERNAME: test_user1 | |
| TEST2_PASSWORD: test | |
| H5PYD_TEST_FOLDER: /home/test_user1/h5pyd_tests/ | |
| HS_ENDPOINT: http://127.0.0.1:5101 | |
| run: | | |
| python testall.py | |
| - name: Shut down Docker | |
| if: ${{matrix.build-method == 'docker' && matrix.os != 'windows-latest'}} | |
| run: | | |
| ./stopall.sh | |
| build-and-test-socket: | |
| env: | |
| ADMIN_PASSWORD: admin | |
| ADMIN_USERNAME: admin | |
| USER_NAME: test_user1 | |
| USER_PASSWORD: test | |
| USER2_NAME: test_user2 | |
| USER2_PASSWORD: test | |
| HSDS_USERNAME: test_user1 | |
| HSDS_PASSWORD: test | |
| HSDS_PATH: /home/test_user1/ | |
| HDF5_API_TEST_PATH_PREFIX: /home/test_user1/ | |
| HSDS_ENDPOINT: http+unix://%2Ftmp%2Fhs%2Fsn_1.sock | |
| HDF5_VOL_CONNECTOR: REST | |
| ROOT_DIR: ${{github.workspace}}/hsdsdata | |
| BUCKET_NAME: hsdstest | |
| name: Test HSDS with socket | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.12"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install HSDS dependencies | |
| shell: bash | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pytest | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Install HSDS package | |
| shell: bash | |
| run: | | |
| pip install -e . | |
| # Requests 2.32.0 breaks requests-unixsocket, used by HSDS for socket connections | |
| # - name: Fix requests version | |
| # run: | | |
| # pip install requests==2.31.0 | |
| - name: Run HSDS unit tests | |
| shell: bash | |
| run: | | |
| pytest | |
| - name: Start HSDS | |
| run: | | |
| mkdir ${{github.workspace}}/hsdsdata | |
| mkdir ${{github.workspace}}/hsdsdata/hsdstest | |
| cp admin/config/groups.default admin/config/groups.txt | |
| cp admin/config/passwd.default admin/config/passwd.txt | |
| ROOT_DIR=${{github.workspace}}/hsdsdata ./runall.sh --no-docker 1 & | |
| sleep 10 | |
| - name: Test HSDS setup | |
| run: | | |
| python tests/integ/setup_test.py | |
| - name: Test HSDS | |
| run : | | |
| python testall.py |