Template structure for analyzing a single-unit dataset.
This is a template repository for a standard layout for analyzing a single-unit project.
This template follows the general purpose ProjectTemplate layout from StructuredScience.
For information on how to use this template in a project, see the HSUPipeline Guide.
Note: if copying this template for use, this section can be removed.
Provide an overview of the analysis project here, for example:
This repository analyses data from the XX task, which is XX.
Fill in any extra requirements here.
This repository requires Python >= 3.7.
As well as typical scientific Python packages, dependencies include:
The full list of dependencies is listed in requirements.txt.
Add any details about repository layout here.
This repository is set up in the following way:
code/contains custom code and utilitiesnotebooks/contains notebooks for exploring analysesscripts/contains stand alone scripts
Add any notes about the dataset here
The datasets analyzed in this project are from human subjects with implanted microwires.
Data notes:
- Datasets for this project are organized into the NWB format.
- Basic preprocessing and data conversion is done in the ConvertXX repository [ADD LINK].
- Spike sorting, to isolate putative single-neurons, has been performed on this data.