Skip to content

Issues: HelikarLab/FastqToGeneCounts

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

8 Open 15 Closed
8 Open 15 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Include documentation on how to set up a configuration file
#73 opened Nov 16, 2023 by sm1216
Error in fasterq_dump
#64 opened Apr 14, 2023 by sarahMIRI
Test single cell alignment against known results priority:normal state:open This is still being planned subsystem:snakemake This relates specifically to snakemake subsystem:tests This relates to unit tests type:feature
#49 opened Jan 3, 2023 by JoshLoecker
@JoshLoecker
Include single-cell alignment into rule star_align priority:normal state:open This is still being planned type:feature
#48 opened Jan 3, 2023 by JoshLoecker
@JoshLoecker
Convert all "S" instances (single-end) into "SE" to reduce confusion when using single-cell abbreviations in the future priority:normal state:in-progress This is being worked on subsystem:snakemake This relates specifically to snakemake type:feature
#47 opened Jan 3, 2023 by JoshLoecker
@JoshLoecker
Trimming leaves adapter sequences longer than 90 base pairs priority:normal state:in-progress This is being worked on subsystem:snakemake This relates specifically to snakemake type:bug This isn't working
#45 opened Dec 7, 2022 by JoshLoecker
MultiQC Extra Folderes priority:minor state:open This is still being planned subsystem:snakemake This relates specifically to snakemake type:cosmetics This is a visual issue
#33 opened Oct 19, 2022 by JoshLoecker
Installation Script priority:normal state:open This is still being planned subsystem:other This issue relates to something not defined in another "subsystem" type:feature type:usability This is impacting end-user usability
#5 opened Sep 6, 2022 by JoshLoecker
ProTip! Updated in the last three days: updated:>2024-10-29.