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hca dss download
the bundle manifest, bundle.json that is included with the download is not in the same format as a get-bundle command.
bundle.json
get-bundle
{ "bundle":{ "creator_uid":8008, "files":{ "10x_sequencing_protocol.pdf":{ "content-type":"application/pdf; dcp-type=data", "crc32c":"47441108", "indexed":false, "name":"10x_sequencing_protocol.pdf", "s3_etag":"67e93ad84439bc3515066da4362d2439", "sha1":"194a0f2b6b8db8272f33f3c1f6a2cf2dca26160d", "sha256":"b6b98dc6b82be35951bf0a8f47cd6e1c2262c18ea75532ca0800223d1f846910", "size":5645416, "uuid":"3a838dcb-162f-4710-b336-4319bd6dbd27", "version":"2019-05-15T202624.755402Z" }, "cell_suspension_0.json":{ "content-type":"application/json; dcp-type=\"metadata/biomaterial\"", "crc32c":"efe9b66c", "indexed":true, "name":"cell_suspension_0.json", "s3_etag":"134e5625dbb5ba5aa4e9eed4e74e90c0", "sha1":"9cdfe16e247c6ba34d99e613eae4205acb62ed0c", "sha256":"50c5245ffd7ddf3d0ba3a10fd408f432c4378794ec8a048d8714d15ec2f4af45", "size":1271, "uuid":"b8ccad6c-4240-4c49-af2e-837fb8b7df71", "version":"2019-05-15T183025.169000Z" }, "dissociation_protocol_0.json":{ "content-type":"application/json; dcp-type=\"metadata/protocol\"", "crc32c":"565da42d", "indexed":true, "name":"dissociation_protocol_0.json", "s3_etag":"c376c15880b58c35a9d02cb05c8177a7", "sha1":"90e27224163afa4f50117b3197d303488faf1946", "sha256":"116a9579cafff8a66d9c9c25cb7c7d89177bf8dae434483f3ca3b92dfcc8df29", "size":911, "uuid":"bfa6a3f9-250a-4a0c-a238-041e460e42f5", "version":"2019-05-15T183022.087000Z" }, "donor_organism_0.json":{ "content-type":"application/json; dcp-type=\"metadata/biomaterial\"", "crc32c":"6f999028", "indexed":true, "name":"donor_organism_0.json", "s3_etag":"8f658260f0223c8c7211aac9ced7bb78", "sha1":"2bef6a208c620664bc157dea179c5f2d0211fc39", }, "uuid":"20fe3336-1dcc-4ee6-851a-3a6748015afb", "version":"2019-05-15T202438.811000Z" } }
"bundle": { "creator_uid": 8008, "files": [ { "content-type": "application/json; dcp-type=\"metadata/biomaterial\"", "crc32c": "efe9b66c", "indexed": true, "name": "cell_suspension_0.json", "s3_etag": "134e5625dbb5ba5aa4e9eed4e74e90c0", "sha1": "9cdfe16e247c6ba34d99e613eae4205acb62ed0c", "sha256": "50c5245ffd7ddf3d0ba3a10fd408f432c4378794ec8a048d8714d15ec2f4af45", "size": 1271, "uuid": "b8ccad6c-4240-4c49-af2e-837fb8b7df71", "version": "2019-05-15T183025.169000Z" }, { "content-type": "application/json; dcp-type=\"metadata/biomaterial\"", "crc32c": "5e6c1c3f", "indexed": true, "name": "specimen_from_organism_0.json", "s3_etag": "92058d8e38c80f6ab7d3e63f8811de05", "sha1": "c03c0807f182e8cc7f490f7bb88221c682316e2f", "sha256": "edb2a7fa9811d7a22bd7c787f86075dd542599258c772416c6595a0b3529bb6f", "size": 1489, "uuid": "2ec7164c-136d-4854-9bbd-1f08a2065e08", "version": "2019-05-15T183025.252000Z" }, { "content-type": "application/json; dcp-type=\"metadata/biomaterial\"", "crc32c": "6f999028", "indexed": true, "name": "donor_organism_0.json", "s3_etag": "8f658260f0223c8c7211aac9ced7bb78", "sha1": "2bef6a208c620664bc157dea179c5f2d0211fc39", "sha256": "4a1054be5793abdaaa8a80ea218d85d054c85090e362ba6ecde1f2548fcbdfd0", "size": 1917, "uuid": "b052bb75-f84f-4b90-b9e1-122e2325f76d", "version": "2019-05-15T183023.548000Z" }, { "content-type": "application/json; dcp-type=\"metadata/file\"", "crc32c": "27c53144", "indexed": true, "name": "sequence_file_0.json", "s3_etag": "ed37154c5176bb190210bda027c2e950", "sha1": "b3462bf4be89d643518e87bdb1b4f757734130c5", "sha256": "80502b1bb315df5faec7c33052e686e79ad766e050ef64f33b88048071dca6a6", "size": 538, "uuid": "0bc5e814-158c-4f58-af89-e6db416a4a62", "version": "2019-05-15T183457.511000Z" } ], "uuid": "20fe3336-1dcc-4ee6-851a-3a6748015afb", "version": "2019-05-15T202438.811000Z" } } the files key should have a list of json objects.
The text was updated successfully, but these errors were encountered:
Correct bundle.json format from dict to array (#398)
9ec2d03
6e6257f
bb54797
This needs to be released
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jessebrennan
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the bundle manifest,
bundle.json
that is included with the download is not in the same format as aget-bundle
command.hca dss download
get-bundle
The text was updated successfully, but these errors were encountered: