Fix monitoring image setup (#190)

* Update lira_utils.py * Fix spacing * Fix linting errors
HumanCellAtlas · Oct 28, 2019 · 806c691 · 806c691
1 parent 144f9cb
commit 806c691
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/lira/lira_utils.py b/lira/lira_utils.py
@@ -271,6 +271,11 @@ def compose_config_options(cromwell_options_file, lira_config):
  if monitoring_image:
  options_json['monitoring_image'] = lira_config.monitoring_image
 
+ # Required to trigger the cloud function that records Cromwell metadata in BigQuery
+ options_json[
+ 'final_workflow_log_dir'
+ ] = f'{lira_config.google_project}-cromwell-logs'
+
  # Defer to value already in options file if it exists
  # Docs on default runtime attributes: https://cromwell.readthedocs.io/en/latest/wf_options/Overview/
  runtime_parameters = options_json.get('default_runtime_attributes', {})