Tweak min cand size to complement Isaac bandsize

Illumina · Apr 4, 2014 · f03fa00 · f03fa00
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Showing 2 changed files with 1 addition and 3 deletions.
diff --git a/README.md b/README.md
@@ -14,8 +14,6 @@ of structural variants which can be identified in the absence of copy number
 analysis and large-scale assembly. See the user guide for a full description of
 capabilities and limitations.
 
-_Note: This software is under development and not supported for general use._
-
 
 Build instructions
 ------------------

diff --git a/src/python/bin/configManta.py.ini b/src/python/bin/configManta.py.ini
@@ -7,7 +7,7 @@
 referenceFasta = /illumina/development/Isis/Genomes/Homo_sapiens/UCSC/hg19/Sequence/WholeGenomeFasta/genome.fa
 
 # Run discovery and candidate reporting for all SVs/indels at or above this size:
-minCandidateVariantSize = 10
+minCandidateVariantSize = 7
 
 # After candidate identification, only score and report SVs/indels at or above this size:
 minScoredVariantSize = 51