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manta-0.14.0

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@ctsa ctsa released this 26 Nov 20:49
· 1567 commits to master since this release
v0.14.0
9f0eee4
  • MANTA-102 filter calls with high MQ0 fraction
  • MANTA-99 add high-depth graph filter to improve FFPE runtime
  • MANTA-100 allow for neighbouring variants during assembly
  • MANTA-83 sort vcfs in bam chrom order
  • MANTA-96 Keep matching read pairs after candidate generation
    read buffer fills
  • MANTA-89 Use semi-mapped read pairs to improve germline/somatic
    classification.
  • MANTA-92 Add edge runtime performance log
  • MANTA-75 Better match reads to SV candidates to improve
    runtime and lower repeat observations
  • MANTA-85 Increase uniformity of tags in vcf output
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