remove quantreg from suggests

IndrajeetPatil · Mar 17, 2019 · 972e711 · 972e711 · lintr-bot · Mar 17, 2019
1 parent 1670dcb
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -74,7 +74,6 @@ Suggests:
     lme4,
     MCMCglmm,
     ordinal,
-    quantreg,
     readr,
     rmarkdown,
     robust,

diff --git a/R/helpers_ggbetween_anova_subtitles.R b/R/helpers_ggbetween_anova_subtitles.R
@@ -423,7 +423,6 @@ subtitle_anova_robust <- function(data,
                                   k = 2,
                                   ...) {
 
-
   # creating a dataframe
   data <-
     dplyr::select(
@@ -470,7 +469,6 @@ subtitle_anova_robust <- function(data,
     k.parameter = k
   )
 
-
   # message about effect size measure
   if (isTRUE(messages)) {
     effsize_ci_message(nboot = nboot, conf.level = conf.level)

diff --git a/codemeta.json b/codemeta.json
@@ -166,18 +166,6 @@
       },
       "sameAs": "https://CRAN.R-project.org/package=ordinal"
     },
-    {
-      "@type": "SoftwareApplication",
-      "identifier": "quantreg",
-      "name": "quantreg",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=quantreg"
-    },
     {
       "@type": "SoftwareApplication",
       "identifier": "readr",

diff --git a/docs/articles/web_only/ggcoefstats.html b/docs/articles/web_only/ggcoefstats.html
diff --git a/docs/articles/web_only/ggcoefstats_files/figure-html/gam_mgcv-1.png b/docs/articles/web_only/ggcoefstats_files/figure-html/gam_mgcv-1.png
diff --git a/docs/articles/web_only/ggcoefstats_files/figure-html/glm2-1.png b/docs/articles/web_only/ggcoefstats_files/figure-html/glm2-1.png
diff --git a/docs/articles/web_only/gghistostats_files/figure-html/grouped1-1.png b/docs/articles/web_only/gghistostats_files/figure-html/grouped1-1.png
diff --git a/docs/articles/web_only/ggstatsplot_paper.html b/docs/articles/web_only/ggstatsplot_paper.html
diff --git a/docs/articles/web_only/ggstatsplot_paper_files/figure-html/library-1.png b/docs/articles/web_only/ggstatsplot_paper_files/figure-html/library-1.png
diff --git a/docs/articles/web_only/session_info.html b/docs/articles/web_only/session_info.html
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/reference/figures/README-ggbarstats1-1.png b/docs/reference/figures/README-ggbarstats1-1.png
diff --git a/docs/reference/figures/README-ggbarstats2-1.png b/docs/reference/figures/README-ggbarstats2-1.png
diff --git a/docs/reference/figures/README-ggbetweenstats1-1.png b/docs/reference/figures/README-ggbetweenstats1-1.png
diff --git a/docs/reference/figures/README-ggbetweenstats2-1.png b/docs/reference/figures/README-ggbetweenstats2-1.png
diff --git a/docs/reference/figures/README-ggbetweenstats3-1.png b/docs/reference/figures/README-ggbetweenstats3-1.png
diff --git a/docs/reference/figures/README-ggbetweenstats4-1.png b/docs/reference/figures/README-ggbetweenstats4-1.png
diff --git a/docs/reference/figures/README-gghistostats1-1.png b/docs/reference/figures/README-gghistostats1-1.png
diff --git a/docs/reference/figures/README-gghistostats2-1.png b/docs/reference/figures/README-gghistostats2-1.png
diff --git a/docs/reference/figures/README-ggpiestats1-1.png b/docs/reference/figures/README-ggpiestats1-1.png
diff --git a/docs/reference/figures/README-ggpiestats2-1.png b/docs/reference/figures/README-ggpiestats2-1.png
diff --git a/docs/reference/figures/README-ggpiestats3-1.png b/docs/reference/figures/README-ggpiestats3-1.png
diff --git a/docs/reference/figures/README-ggpiestats4-1.png b/docs/reference/figures/README-ggpiestats4-1.png
diff --git a/docs/reference/figures/README-ggscatterstats1-1.png b/docs/reference/figures/README-ggscatterstats1-1.png
diff --git a/docs/reference/figures/README-ggscatterstats2-1.png b/docs/reference/figures/README-ggscatterstats2-1.png
diff --git a/docs/reference/figures/README-ggscatterstats3-1.png b/docs/reference/figures/README-ggscatterstats3-1.png
diff --git a/man/figures/README-ggbarstats1-1.png b/man/figures/README-ggbarstats1-1.png
diff --git a/man/figures/README-ggbarstats2-1.png b/man/figures/README-ggbarstats2-1.png
diff --git a/man/figures/README-ggbetweenstats1-1.png b/man/figures/README-ggbetweenstats1-1.png
diff --git a/man/figures/README-ggbetweenstats2-1.png b/man/figures/README-ggbetweenstats2-1.png
diff --git a/man/figures/README-ggbetweenstats3-1.png b/man/figures/README-ggbetweenstats3-1.png
diff --git a/man/figures/README-ggbetweenstats4-1.png b/man/figures/README-ggbetweenstats4-1.png
diff --git a/man/figures/README-ggcoefstats1-1.png b/man/figures/README-ggcoefstats1-1.png
diff --git a/man/figures/README-ggcoefstats2-1.png b/man/figures/README-ggcoefstats2-1.png
diff --git a/man/figures/README-ggcorrmat1-1.png b/man/figures/README-ggcorrmat1-1.png
diff --git a/man/figures/README-ggcorrmat3-1.png b/man/figures/README-ggcorrmat3-1.png
diff --git a/man/figures/README-ggdotplotstats1-1.png b/man/figures/README-ggdotplotstats1-1.png
diff --git a/man/figures/README-ggdotplotstats2-1.png b/man/figures/README-ggdotplotstats2-1.png
diff --git a/man/figures/README-gghistostats1-1.png b/man/figures/README-gghistostats1-1.png
diff --git a/man/figures/README-gghistostats2-1.png b/man/figures/README-gghistostats2-1.png
diff --git a/man/figures/README-gghistostats4-1.png b/man/figures/README-gghistostats4-1.png
diff --git a/man/figures/README-ggpiestats1-1.png b/man/figures/README-ggpiestats1-1.png
diff --git a/man/figures/README-ggpiestats2-1.png b/man/figures/README-ggpiestats2-1.png
diff --git a/man/figures/README-ggpiestats3-1.png b/man/figures/README-ggpiestats3-1.png
diff --git a/man/figures/README-ggpiestats4-1.png b/man/figures/README-ggpiestats4-1.png
diff --git a/man/figures/README-ggscatterstats1-1.png b/man/figures/README-ggscatterstats1-1.png
diff --git a/man/figures/README-ggscatterstats2-1.png b/man/figures/README-ggscatterstats2-1.png
diff --git a/man/figures/README-ggscatterstats3-1.png b/man/figures/README-ggscatterstats3-1.png
diff --git a/man/figures/README-pirateplot-1.png b/man/figures/README-pirateplot-1.png
diff --git a/man/figures/README-theme_ggstatsplot-1.png b/man/figures/README-theme_ggstatsplot-1.png
diff --git a/tests/testthat/test_ggcoefstats.R b/tests/testthat/test_ggcoefstats.R
@@ -634,54 +634,6 @@ testthat::test_that(
   }
 )
 
-# check quantreg output ----------------------------------------------
-
-testthat::test_that(
-  desc = "check quantreg output",
-  code = {
-    testthat::skip_on_cran()
-
-    # set up
-    set.seed(123)
-    library(quantreg)
-    data(stackloss)
-
-    # model
-    mod <-
-      quantreg::rq(
-        formula = stack.loss ~ stack.x,
-        data = stackloss,
-        method = "br"
-      )
-
-    # broom outputs
-    broom_df <-
-      broom::tidy(
-        x = mod,
-        se.type = "iid",
-        conf.int = TRUE,
-        conf.level = 0.90
-      )
-
-    # ggcoefstats outputs
-    tidy_df <- ggstatsplot::ggcoefstats(
-      x = mod,
-      se.type = "iid",
-      exclude.intercept = FALSE,
-      conf.level = 0.90,
-      output = "tidy"
-    )
-
-    # testing
-    testthat::expect_identical(broom_df$term, as.character(tidy_df$term))
-    testthat::expect_equal(broom_df$estimate, tidy_df$estimate, tolerance = 0.001)
-    testthat::expect_equal(broom_df$std.error, tidy_df$std.error, tolerance = 0.001)
-    testthat::expect_equal(broom_df$p.value, tidy_df$p.value, tolerance = 0.001)
-    testthat::expect_equal(broom_df$conf.low, tidy_df$conf.low, tolerance = 0.001)
-    testthat::expect_equal(broom_df$conf.high, tidy_df$conf.high, tolerance = 0.001)
-  }
-)
-
 # check gmm output ----------------------------------------------
 
 testthat::test_that(
@@ -1373,12 +1325,20 @@ testthat::test_that(
     cfit <- coxph(Surv(time, status) ~ age + sex, lung)
     mod2 <- survfit(cfit)
 
-    # test failures
-    testthat::expect_error(
-      ggstatsplot::ggcoefstats(x = mod1)
-    )
-    testthat::expect_error(
-      ggstatsplot::ggcoefstats(x = mod2)
+    # mod-3
+    mod3 <- stats::aov(
+      formula = value ~ attribute * measure + Error(id / (attribute * measure)),
+      data = iris_long
     )
+
+    # plot
+    p <- ggstatsplot::ggcoefstats(mod3)
+    pb <- ggplot2::ggplot_build(p)
+
+    # test failures
+    testthat::expect_error(ggstatsplot::ggcoefstats(x = mod1))
+    testthat::expect_error(ggstatsplot::ggcoefstats(x = mod2))
+    testthat::expect_null(pb$plot$labels$subtitle, NULL)
+
   }
 )