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itkwidgets on Google CoLab #99
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Just found this: https://stackoverflow.com/questions/47269168/ipywidgets-with-google-colaboratory :( |
Hey @vianamp , Yes, please follow and thumbs up this issue: |
UPDATE: you will be able to use the |
@thewtex and @oeway This new function is so cool!!!! I have a question about the using itkwidgets on colab. Here is a working example I made for testing the viewer : https://github.com/AllenInstitute/aics-segmentation/blob/colab/lookup_table_demo/test_viewer.ipynb It works well so far. But, i would like to extract the ROI from the ROI selection in the viewer. Previously, I can do this
I am not sure how to extract ROI with the new ImJoy layer |
@jxchen01 Thanks! We don't have ROI widget support in the itk-vtk-viewer yet, it would be nice to have this feature indeed. @thewtex what do you think? Related to this, I am also interested in having the PaintWidget working in the viewer at some point( e.g. adding a new channel and use the paint widget to do annotation). |
Works in Colab! Addresses InsightSoftwareConsortium#99, more can be done with the window size. Co-authored-by: Brianna Major <brianna.major@kitware.com> Co-authored-by: Wei Ouyang <oeway007@gmail.com>
Rebasing on ImJoy magic for CoLab support! 🎉
to test. CSS issues in the output, currently using the @bnmajor maybe the CSS here can be adjusted? |
Or, we should be using the |
Hi guys.
Have any of you tried to run itkwidgets on Google Colab?
I got the package installed with
!pip
, but the moment I tryview(image)
, the thing keeps running forever. Could that be because the free server where I am running the notebook in is just not good enough for 3D view? It is a small image though 32x32x32.Any thoughts?
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