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A short process to make decisions about, segmentation and mask generation for biological images

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JairMathAI/Image_analysis_neurons

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Project description

This project is designed to work with batches of RGB immunolabeled neuron images:

Green channel: contain the information of the label for neurons.
Blue channel: contain the information of the label neurons nuclei.
Red channel: contain the information of the label of neurons expressing c-fos.

In this project, a Jupyter Lab notebook is proposed to facilitate decision-making in the generation of masks that contain regions expressing markers in the three channels for stitched images. This was developed to support a master's thesis research.

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A short process to make decisions about, segmentation and mask generation for biological images

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