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Release 0.3.0 #67
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Merged
Release 0.3.0 #67
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Plus some documentation reoorganization.
This was referenced Sep 16, 2019
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All is ready for the 1.0 release. Just need to re-do the documentation. That means
CausalityToolsBase
RectangularBinning
docs. Done in CausalityToolsBase.jl PR #13.TriangulationBinning
docs. CausalityToolsBase.jl PR #13.encode
docs with example. Done in CausalityToolsBase.jl PR #14.joint_visits
docs with examples. Done in CausalityToolsBase.jl PR #14.marginal_visits
docs with examples. Done in CausalityToolsBase.jl PR #14.non0hist
docs with examples. MentionDelayEmbeddings
. Done in CausalityToolsBase.jl PR #14.get_minima
,get_maxima
,get_edgelengths
,get_minima_and_edgelengths
,get_minmaxes
docs with examples. Done in CausalityToolsBase.jl PR #14.generate_gridpoints
docs with and figure demonstrating the types of grid. Done in CausalityToolsBase.jl PR #14.OnPoints
docs. Done in CausalityToolsBase.jl PR #14.Figure demonstrating the types of grid obtaining from
generate_gridpoints
.kerneldensity
docs with example. Done in CausalityToolsBase.jl PR #14.Embedding dimension and lag estimation.
optimal_delay
andoptimal_dimension
docs with examples. MentionDelayEmbeddings
. Done in CausalityToolsBase.jl PR #14.Positions
docs with examples. Refers toCustomReconstructions
.Lags
docs with examples. Refers toCustomReconstructions
.CustomReconstruction
docs with examples.customembed
docs with examples.mutualinfo
docs with example. Needs more work. Saving for later.Example systems
DiscreteDynamicalSystem
is used for all discrete, even for the multi-lag ones.Invariant measures and transfer operators
Transfer entropy
transferentropy(pts, v::TEVars, binning_scheme::RectangularBinning, estimator::VisitationFrequency
docs with example.transferentropy(pts, v::TEVars, binning_scheme::RectangularBinning, estimator::TransferOperatorGrid
docs with example.Distance based algorithms
joint_distance_distribution