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Optimize ArbitraryMotion (continuation) #408

Merged
merged 115 commits into from
Jun 27, 2024
Merged

Optimize ArbitraryMotion (continuation) #408

merged 115 commits into from
Jun 27, 2024

Commits on May 31, 2024

  1. First commit

    @pvillacorta
    pvillacorta committed May 31, 2024
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  2. Fix bugs and pass tests

    @pvillacorta
    pvillacorta committed May 31, 2024
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Commits on Jun 2, 2024

  1. Merge branch 'master' into optimize-arbitrary

    @pvillacorta
    pvillacorta authored Jun 2, 2024
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Commits on Jun 4, 2024

  1. Merge branch 'master' into optimize-arbitrary

    @pvillacorta
    pvillacorta authored Jun 4, 2024
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  2. Simplify adapt functions

    @pvillacorta
    pvillacorta committed Jun 4, 2024
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Commits on Jun 12, 2024

  1. ExplicitArbitraryMotion, sort_motions! -> initialize_motion

    @pvillacorta
    pvillacorta committed Jun 12, 2024
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  2. Minor change in plot_image

    @pvillacorta
    pvillacorta committed Jun 12, 2024
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  3. Merge branch 'master' of https://github.com/pvillacorta/KomaMRI.jl

    @pvillacorta
    pvillacorta committed Jun 12, 2024
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  4. Merge branch 'master' into optimize-arbitrary-parallel

    @pvillacorta
    pvillacorta committed Jun 12, 2024
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Commits on Jun 14, 2024

  1. Delete ExplicitArbitraryMotion, custom GriddedInterpolation function

    @pvillacorta
    pvillacorta committed Jun 14, 2024
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  2. Merge branch 'JuliaHealth:master' into master

    @pvillacorta
    pvillacorta authored Jun 14, 2024
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  3. Improve adapt a bit also for SimpleMotion. Use functor

    @pvillacorta
    pvillacorta committed Jun 14, 2024
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  4. Remove comments

    @pvillacorta
    pvillacorta committed Jun 14, 2024
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  5. Simplify getindex for ArbitraryMotion

    @pvillacorta
    pvillacorta committed Jun 14, 2024
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Commits on Jun 15, 2024

  1. Merge branch 'master' of https://github.com/pvillacorta/KomaMRI.jl

    @pvillacorta
    pvillacorta committed Jun 15, 2024
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  2. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta committed Jun 15, 2024
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  3. Solve typo

    @pvillacorta
    pvillacorta committed Jun 15, 2024
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  4. Delete adapt for ArbitraryMotion

    @pvillacorta
    pvillacorta committed Jun 15, 2024
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  5. Improve code coverage

    @pvillacorta
    pvillacorta committed Jun 15, 2024
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Commits on Jun 17, 2024

  1. Not exporting unnecessary things

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  2. Add testset macro

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  3. Add specific identifiers

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  4. Add path for avoiding errors

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  5. Add aux functions to tests

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  6. Fix typo

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  7. Remove collect

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  8. Simplify range

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  9. Fix error from previous commit

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  10. Interpolation creation with ranges

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  11. Evaluate using UnitRange for spin id

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  12. Change functions names

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  13. Fix test for ArbitraryMotion

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  14. Simplify vcat for ArbitraryMotion

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  15. Recover return

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  16. Simplify ArbitraryMotion read and write

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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  17. Remove K from tests

    @pvillacorta
    pvillacorta committed Jun 17, 2024
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Commits on Jun 18, 2024

  1. Improve unit_time functions

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  2. Continuation of last commit

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  3. Add tests when t_start= t_end

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  4. Correct typos in SimpleMotionTypes docstrings

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  5. Delete maxlog=1 and use scattergl

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  6. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta authored Jun 18, 2024
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  7. Correct view bug

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  8. Dispatch on Val(Ns)

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  9. one -> oneunit

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  10. fields -> phantom_fields

    @pvillacorta
    pvillacorta committed Jun 18, 2024
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  11. Merge branch 'master' into fix-plot-phantom

    @pvillacorta
    pvillacorta authored Jun 18, 2024
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Commits on Jun 19, 2024

  1. Resolve functor for SimpleMotion

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  2. Simplify methods of proces_times

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  3. Custom range function for keeping type matching

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  4. Remove TupleTools dependency, initialize_motion -> sort_motion (only … 

    …needed by SimpleMotion)
    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  5. Solve method redefinition problem

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  6. Merge branch 'master' into fix-plot-phantom

    @cncastillo
    cncastillo authored Jun 19, 2024
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  7. Fix rangeT, but use LinRange

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  8. Solve bug

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  9. Change process_times in plot_phantom_map

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  10. Solve bug

    @pvillacorta
    pvillacorta committed Jun 19, 2024
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  11. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta authored Jun 19, 2024
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Commits on Jun 20, 2024

  1. Reduce allocations in get_spin_coords for SimpleMotion

    @pvillacorta
    pvillacorta committed Jun 20, 2024
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Commits on Jun 21, 2024

  1. Remove rangeT

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  2. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  3. Remove :skipci for Simple and Arbitrary Motion

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  4. Try vectors instead of ranges

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  5. Renges with correct eltype

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  6. More testing...

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  7. More...

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  8. t in GPU, id in CPU

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  9. Try with vectors

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  10. Fix bug

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  11. Another bug

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  12. Let's try with LinRange

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  13. copyto!

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  14. Debug

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  15. Revert last change

    @pvillacorta
    pvillacorta committed Jun 21, 2024
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  16. Merge branch 'master' into optimize-arbitrary-view

    @cncastillo
    cncastillo authored Jun 21, 2024
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Commits on Jun 22, 2024

  1. Add :skipci to everything except simple and arbitrary

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  2. Debugging prints

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  3. Remove @Supress temporarily

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  4. Try with grid for interpolate solving

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  5. Try Interpolate directly in test

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  6. More debugging

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  7. Solve type conflict

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  8. Change conversion order

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  9. Try with 2D since 1D works

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  10. Try with using gpu function

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  11. Check if the problem commes from NoInterp

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  12. Try with ranges again

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  13. Back again to vectors

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  14. Final test with vectors and Gridded in both dimensions

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  15. Remove comments and recover :skipci for all testitems

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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  16. Recover @suppress

    @pvillacorta
    pvillacorta committed Jun 22, 2024
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Commits on Jun 24, 2024

  1. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta committed Jun 24, 2024
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  2. Merge branch 'master' into fix-plot-phantom

    @pvillacorta
    pvillacorta committed Jun 24, 2024
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  3. Merge branch 'fix-plot-phantom' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta committed Jun 24, 2024
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  4. Keep scatter for now

    @pvillacorta
    pvillacorta committed Jun 24, 2024
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Commits on Jun 26, 2024

  1. Test the exact desired situation (but with Gridded in both dimensions)

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  2. Solve bug, retry...

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  3. Check if it passes now

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  4. Try with the simplest situation to reproduce

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  5. Try again

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  6. Keep type matching

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  7. Try vectors with the simplest reproducible situation

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  8. Try ranges with the simplest reproducible situation

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  9. Try again but forcing range step to be float32

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  10. Back to vectors, mergeable

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  11. :skipci also for ArbitraryMotion (for now)

    @pvillacorta
    pvillacorta committed Jun 26, 2024
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  12. Merge branch 'master' into optimize-arbitrary-view

    @pvillacorta
    pvillacorta authored Jun 26, 2024
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Commits on Jun 27, 2024

  1. Update KomaMRICore/test/runtests.jl 

    Co-authored-by: Carlos Castillo Passi <cncastillo@uc.cl>
    @pvillacorta @cncastillo
    pvillacorta and cncastillo authored Jun 27, 2024
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  2. _utils.jl -> sorting.jl

    @pvillacorta
    pvillacorta committed Jun 27, 2024
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  3. Use .= instead of copy! for test in Metal

    @pvillacorta
    pvillacorta committed Jun 27, 2024
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  4. All skipci except motions

    @pvillacorta
    pvillacorta committed Jun 27, 2024
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  5. Skipci for all except arbitrarymotion

    @pvillacorta
    pvillacorta committed Jun 27, 2024
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  6. Back to copyto!

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    pvillacorta committed Jun 27, 2024
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  7. Independent test sets for every simple motion

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    pvillacorta committed Jun 27, 2024
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  8. Leave skipcis as they were

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    pvillacorta committed Jun 27, 2024
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