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codegen: take gc roots (and alloca alignment) more seriously
Due to limitations in the LLVM implementation, we are forced to emit fairly bad code here. But we need to make sure it is still correct with respect to GC rooting. The PR 50833c8 also changed the meaning of haspadding without changing all of the existing users to use the new equivalent flag (haspadding || !isbitsegal), incurring additional breakage here as well and needing more tests for that. Fixes #54720
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