Feature inversion pipeline for modular iCNN construction #115
ShuntaroAokici.yml
on: pull_request
lint
9s
type-check
2m 10s
Matrix: test
Annotations
21 errors and 16 warnings
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lint
Process completed with exit code 1.
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Error code: `import-untyped`:
bdpy/util/info.py#L13
Library stubs not installed for "yaml"
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Error code: `arg-type`:
bdpy/util/info.py#L24
Argument 1 to "md5" has incompatible type "str"; expected "Buffer"
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Error code: `import-untyped`:
bdpy/fig/tile_images.py#L5
Skipping analyzing "matplotlib.pyplot": module is installed, but missing library stubs or py.typed marker
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Error code: `import-untyped`:
bdpy/fig/tile_images.py#L5
Skipping analyzing "matplotlib": module is installed, but missing library stubs or py.typed marker
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Error code: `import-untyped`:
bdpy/fig/tile_images.py#L6
Skipping analyzing "matplotlib.gridspec": module is installed, but missing library stubs or py.typed marker
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Error code: `list-item`:
tests/task/test_callback.py#L29
List item 2 has incompatible type "Tuple[Callable[[int, int], int], Tuple[int, int], int]"; expected "Tuple[Callable[..., Any], Tuple[Any], Any]"
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Error code: `var-annotated`:
bdpy/util/utils.py#L48
Need type annotation for "group_vector" (hint: "group_vector: List[<type>] = ...")
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Error code: `assignment`:
bdpy/util/utils.py#L64
Incompatible types in assignment (expression has type "ndarray[Any, dtype[Any]]", variable has type "List[Any]")
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Error code: `union-attr`:
bdpy/util/utils.py#L118
Item "List[Any]" of "Union[List[Any], ndarray[Any, Any]]" has no attribute "ndim"
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Error code: `call-overload`:
bdpy/util/utils.py#L119
No overload variant of "__getitem__" of "list" matches argument type "List[Any]"
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test (3.11):
tests/test_mri.py#L23
TestMri.test_add_load_epi_pass0001
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.11):
tests/test_mri.py#L23
TestMri.test_get_roiflag_pass0001
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.11):
tests/test_mri.py#L23
TestMri.test_get_roiflag_pass0002
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.11)
Process completed with exit code 1.
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test (3.8)
Process completed with exit code 2.
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test (3.10)
Process completed with exit code 1.
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test (3.9):
tests/test_mri.py#L23
TestMri.test_add_load_epi_pass0001
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.9):
tests/test_mri.py#L23
TestMri.test_get_roiflag_pass0001
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.9):
tests/test_mri.py#L23
TestMri.test_get_roiflag_pass0002
FileNotFoundError: [Errno 2] No such file or directory: '/home/runner/work/bdpy/bdpy/tests/data/mri/epi.mat'
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test (3.9)
Process completed with exit code 1.
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lint
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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type-check
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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type-check:
bdpy/util/utils.py#L119
Possible overload variants:
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type-check:
bdpy/util/utils.py#L121
Possible overload variants:
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type-check:
bdpy/dataset/utils.py#L11
Hint: "python3 -m pip install types-tqdm"
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type-check:
bdpy/dataset/utils.py#L11
(or run "mypy --install-types" to install all missing stub packages)
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type-check:
bdpy/dataset/utils.py#L11
See https://mypy.readthedocs.io/en/stable/running_mypy.html#missing-imports
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Error code: `annotation-unchecked`:
bdpy/dataform/features.py#L382
By default the bodies of untyped functions are not checked, consider using --check-untyped-defs
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test (3.11)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-python@v4, MishaKav/pytest-coverage-comment@v1.1.47. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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test (3.8)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-python@v4, MishaKav/pytest-coverage-comment@v1.1.47. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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test (3.8)
File "/home/runner/work/bdpy/bdpy/pytest-coverage.txt" doesn't exist
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test (3.8)
File "/home/runner/work/bdpy/bdpy/pytest.yml" doesn't exist
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test (3.10)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-python@v4, MishaKav/pytest-coverage-comment@v1.1.47. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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test (3.10)
File "/home/runner/work/bdpy/bdpy/pytest-coverage.txt" doesn't exist
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test (3.10)
File "/home/runner/work/bdpy/bdpy/pytest.yml" doesn't exist
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test (3.9)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-python@v4, MishaKav/pytest-coverage-comment@v1.1.47. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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