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version bump to 2.7.0 #17

version bump to 2.7.0

version bump to 2.7.0 #17

name: Publish Release
on:
workflow_dispatch:
push:
tags:
- "*.*.*"
branches:
- 'release/*'
env:
# Workaround for no ternary operator, use short-circuiting
# I'd love to not repeat the version string, but env can't be recursive
VERSION: ${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}
MAC_PACKAGE: OpenCRAVAT.${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}.pkg
WINDOWS_INSTALLER: OpenCRAVAT-${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}.exe
DOCKER_TAG: ${{ secrets.DOCKER_USERNAME }}/opencravat:${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}
DOCKER_ARCHIVE: opencravat-docker-${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}.tgz
PYPI_SDIST: open-cravat-${{ startsWith(github.ref, 'refs/tags/') && github.ref_name || 'DEV' }}.tar.gz
jobs:
pypi:
runs-on: ubuntu-latest
steps:
- name: Build pypi package
run: echo "Building package on release"
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- run: python setup.py sdist --formats=gztar
- name: Archive Image File
uses: actions/upload-artifact@v4
with:
name: ${{ env.PYPI_SDIST }}
path: ./dist/**
docker:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Build Docker image
uses: docker/build-push-action@v5
with:
context: .
load: true
tags: ${{ env.DOCKER_TAG }}
- name: Save docker image
run: |
docker image save ${{ env.DOCKER_TAG }} | gzip > opencravat-docker-${{ env.VERSION }}.tgz
- name: Archive installer package
uses: actions/upload-artifact@v4
with:
name: ${{ env.DOCKER_ARCHIVE }}
path: ${{ env.DOCKER_ARCHIVE }}
windows:
runs-on: windows-latest
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Install build tools
run: |
choco install innosetup
- name: Build and Package
working-directory: .build\windows
run: |
.\build.ps1 ..\.. ${{env.VERSION}} -Clean -ForceDownload -Build
- name: Archive installer package
uses: actions/upload-artifact@v4
with:
name: ${{ env.WINDOWS_INSTALLER }}
path: .build\windows\Output\${{ env.WINDOWS_INSTALLER }}
mac:
runs-on: macos-14
env:
MINICONDA_DIST: Miniconda3-py311_24.1.2-0-MacOSX-x86_64
PLATYPUS_RESOURCES: /Applications/Platypus.app/Contents/Resources
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Install build tools
run: |
brew install --cask platypus
sudo mkdir -p /usr/local/share/platypus
gunzip ${PLATYPUS_RESOURCES}/platypus_clt.gz
gunzip ${PLATYPUS_RESOURCES}/ScriptExec.gz
chmod +x ${PLATYPUS_RESOURCES}/ScriptExec
sudo cp ${PLATYPUS_RESOURCES}/ScriptExec /usr/local/share/platypus/ScriptExec
sudo cp -r ${PLATYPUS_RESOURCES}/MainMenu.nib /usr/local/share/platypus/MainMenu.nib
curl -o miniconda.sh https://repo.anaconda.com/miniconda/${MINICONDA_DIST}.sh
chmod +x miniconda.sh
./miniconda.sh -b -p ./miniconda -u
- name: Build and Package
run: |
miniconda/bin/conda init bash
. ~/.bash_profile
conda create -y -n py3 python=3.11 pip
conda activate py3
cd .build/mac
${PLATYPUS_RESOURCES}/platypus_clt -a OpenCRAVAT -u "Karchin Lab" -V $VERSION -I org.karchinlab.open-cravat -i ./AppIcon.icns -y ./script ./OpenCRAVAT.app
./make.sh ../..
./package.sh $VERSION
- name: Archive installer package
uses: actions/upload-artifact@v4
with:
name: ${{ env.MAC_PACKAGE }}
path: .build/mac/${{ env.MAC_PACKAGE }}
publish:
runs-on: ubuntu-latest
needs:
- mac
- windows
- pypi
- docker
environment: Published
if: startsWith(github.ref, 'refs/tags/')
steps:
# Downloads all the artifacts from above, and extract them into
# a directory named after the artifact itself, but since the
# artifacts are all named after their contained package the naming
# looks weird.
# An artifact named OpenCravat-2.5.0.exe.zip will extract to a
# directory named OpenCravat-2.5.0.exe and contain
# OpenCravat-2.5.0.exe
- name: Download all workflow run artifacts
uses: actions/download-artifact@v4
- name: Load Docker Image
run: |
docker load -i ${{ env.DOCKER_ARCHIVE }}/${{ env.DOCKER_ARCHIVE }}
- name: Login to Docker Hub
uses: docker/login-action@v3
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}
# this should only push since the tagged image was loaded above
- name: Publish Docker image
run: |
docker push ${{ env.DOCKER_TAG }}
- name: Publish to PyPi
uses: pypa/gh-action-pypi-publish@release/v1
with:
packages-dir: ${{ env.PYPI_SDIST }}
password: ${{ secrets.PYPI_API_TOKEN }}
- name: Release Images
uses: softprops/action-gh-release@v2
with:
draft: true
files: |
- ${{ env.MAC_PACKAGE }}/${{ env.MAC_PACKAGE }}
- ${{ env.WINDOWS_INSTALLER }}/${{ env.WINDOWS_INSTALLER }}