SQUID v1.5

fix bug in reading bam alignment record.

SQUID v1.4

Fix bugs.
Change output score into raw number of read supports (divided by discordant edge ratio multiplier).
Add concordant read coverage of each breakpoint in the output.

SQUID v1.3

Fix bugs in segmenting genome and filtering interleaving edges.
Add segment degree threshold to the argument list.

SQUID v1.2

Fix bug with first read unmapped issue.

SQUID v1.1

Fixed double free error and munmap_chunk error.

SQUID v1.0

Binaries are available for linux and macOS.
Compiling from source code requires the open source libraries bamtools and glpk.