Merge branch 'main' of https://github.com/Kuanhao-Chao/splam

README.md

@@ -4,7 +4,7 @@
 </p>
 
 
-[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT) ![version](https://img.shields.io/badge/version-v.1.0.2-blue) [![GitHub Downloads](https://img.shields.io/github/downloads/Kuanhao-Chao/splam/total.svg?style=social&logo=github&label=Download)](https://github.com/Kuanhao-Chao/splam/releases) ![os](https://img.shields.io/badge/platform-macOS_/Linux-green.svg) [![](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/Kuanhao-Chao/splam/blob/main/notebook/splam_example.ipynb)
+[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT) ![version](https://img.shields.io/badge/version-v.1.0.2-blue) [![Downloads](https://static.pepy.tech/personalized-badge/splam?period=total&units=abbreviation&left_color=grey&right_color=blue&left_text=PyPi%20downloads)](https://pepy.tech/project/splam) [![GitHub Downloads](https://img.shields.io/github/downloads/Kuanhao-Chao/splam/total.svg?style=social&logo=github&label=Download)](https://github.com/Kuanhao-Chao/splam/releases) ![os](https://img.shields.io/badge/platform-macOS_/Linux-green.svg) [![](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/Kuanhao-Chao/splam/blob/main/notebook/splam_example.ipynb)
 
 <!-- <a href="https://colab.research.google.com/github/Kuanhao-Chao/splam/blob/main/notebook/splam_example.ipynb" target="_parent"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open In Colab"/></a> -->
 

docs/source/content/generalization.rst

@@ -42,7 +42,7 @@ For non-human species, you need four files for running Splam. It is very similar
 .. admonition:: Assembly report
    :class: important
 
-   For non-human species, remember to include an assembly report with your input files! It is advised to download the assembly report from the same source as your :code:`GFF` or :code:`GTF` annotation file and :code:`FASTA` genome. 
+   For non-human species, remember to include an assembly report with your input files! It is advised to download the assembly report from the `NCBI FTP site <https://ftp.ncbi.nlm.nih.gov/>`, along with your :code:`GFF` or :code:`GTF` annotation file and :code:`FASTA` genome. 
 
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