v1.0.9

v1.0.9 (2023-09-20)

Main features

• Fix the function for extracting chromosome sizes from the FASTA file
• Add two arguments for the Splam extract mode: --fr and --rf. These arguments set the strand if the alignment does not have an XS tag.
  • --fr: assume stranded library fr-secondstrand
  • --rf: assume stranded library rf-firststrand

Documentation:

The link to the documentation: http://ccb.jhu.edu/splam/