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resolved #19 made the improvements_2 as suggested by Evan
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Sidduppal authored and evanroyrees committed Mar 26, 2020
1 parent 409818b commit 46adfdb
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions autometa/common/external/samtools.py
Original file line number Diff line number Diff line change
Expand Up @@ -64,8 +64,7 @@ def run(cmd):

def sort(sam, bam, nproc=mp.cpu_count()):
"""
Views the sam file and then sorts the alighnments by leftmost coordinates.
Ouputs the sorted alighnments in the specified bam file.
Views then sorts sam file by leftmost coordinates and outputs to bam.
Parameters
----------
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