Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

🐍🐎 Large data mode #207

Merged
merged 14 commits into from
Jan 24, 2022
Merged

🐍🐎 Large data mode #207

merged 14 commits into from
Jan 24, 2022

Commits on Dec 21, 2021

  1. 🎨 refactor of recursive_dbscan 

    🎨 add utilities script to hold common binning utilities for binning modules
🎨 update metabin stat summary calculations in summary.py
🎨 Add large_data_mode.py and large_data_mode_loginfo.py modules
    @evanroyrees
    evanroyrees committed Dec 21, 2021
    Configuration menu
    Copy the full SHA
    d40fed3 View commit details
    Browse the repository at this point in the history

  2. 🎨 add autometa-binning-ldm[-info] entrypoints in setup.py

    @evanroyrees
    evanroyrees committed Dec 21, 2021
    Configuration menu
    Copy the full SHA
    97fde76 View commit details
    Browse the repository at this point in the history

  3. 🎨 add logger information to parse large_data_mode.py logs using large… 

    …_data_mode_loginfo.py
    @evanroyrees
    evanroyrees committed Dec 21, 2021
    Configuration menu
    Copy the full SHA
    50b475f View commit details
    Browse the repository at this point in the history

  4. ⬆️ pin scikit-learn to prevent joblib errors

    @evanroyrees
    evanroyrees committed Dec 21, 2021
    Configuration menu
    Copy the full SHA
    f62bd7c View commit details
    Browse the repository at this point in the history

Commits on Jan 5, 2022

  1. Merge branch 'dev' into large-data-mode

    @evanroyrees
    evanroyrees committed Jan 5, 2022
    Configuration menu
    Copy the full SHA
    ce09874 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'large-data-mode' of github.com:KwanLab/Autometa into la… 

    …rge-data-mode
    @evanroyrees
    evanroyrees committed Jan 5, 2022
    Configuration menu
    Copy the full SHA
    4ea89e8 View commit details
    Browse the repository at this point in the history

  3. 🎨🐍 Raise ValueError in get_metabin_stats if input bin_df is not prope… 

    …rly formatted
    @evanroyrees
    evanroyrees committed Jan 5, 2022
    Configuration menu
    Copy the full SHA
    bed6ef7 View commit details
    Browse the repository at this point in the history

Commits on Jan 6, 2022

  1. Merge branch 'dev' into large-data-mode

    @evanroyrees
    evanroyrees committed Jan 6, 2022
    Configuration menu
    Copy the full SHA
    ae6b20c View commit details
    Browse the repository at this point in the history

  2. 🎨 merge dev

    @evanroyrees
    evanroyrees committed Jan 6, 2022
    Configuration menu
    Copy the full SHA
    ebc7fee View commit details
    Browse the repository at this point in the history

  3. 🐚:art: Add autometa-large-data-mode bash workflow

    @evanroyrees
    evanroyrees committed Jan 6, 2022
    Configuration menu
    Copy the full SHA
    e099373 View commit details
    Browse the repository at this point in the history

Commits on Jan 19, 2022

  1. fix dev merge conflicts

    @evanroyrees
    evanroyrees committed Jan 19, 2022
    Configuration menu
    Copy the full SHA
    f2f1709 View commit details
    Browse the repository at this point in the history

Commits on Jan 21, 2022

  1. 🐚🐛🎨 Update entrypoints for autometa-large-data-mode workflow

    @evanroyrees
    evanroyrees committed Jan 21, 2022
    Configuration menu
    Copy the full SHA
    d7db407 View commit details
    Browse the repository at this point in the history

Commits on Jan 24, 2022

  1. Merge branch 'dev' into large-data-mode

    @evanroyrees
    evanroyrees committed Jan 24, 2022
    Configuration menu
    Copy the full SHA
    909fcf2 View commit details
    Browse the repository at this point in the history

  2. 🔥🎨🐛 Update autometa-binning entrypoint args from --domain to --rank-*… 

    … args
    @evanroyrees
    evanroyrees committed Jan 24, 2022
    Configuration menu
    Copy the full SHA
    a6c7f97 View commit details
    Browse the repository at this point in the history