merge nodes when databases out of sync. #9
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…dmp and merged.dmp are out of sync with nr.gz
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I didn't see any code that downloads |
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The merged.dmp file is now also extracted with nodes.dmp and names.dmp |
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This issue has since been resolved in the refactored version. This is a hotfix to master.
The error occurs when the
nr.dmnddatabase search andprot.accession2taxid.gzrecovers taxids different from the tree structure within nodes.dmp. This is easily resolved as NCBI has similarly provided amerged.dmpfile with the old to new taxid translations.