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Checking data under the plots

Cyril Pernet edited this page Oct 13, 2020 · 3 revisions

Image all

The full space results can be seen using the 'image all' option in limo results. Each time you do this, several results are returned.

In the command window
As the figure is plotted, a statistic summary is returned with onsets, offsets, and maxima. The figure is browsable, and each time you click not only it is updated, it also return the t/F value and associated p-value.

In the workspace
The underlying data under the plot are returned: plotted_data = stat_values .* mask>0. The stat_values matrix contains the same as the file you loaded (e.g. condition_effect, covariate, con, etc) while the mask contains significant data point. If clustering is used, regions are labelled.

Basic Stats

When using Basic Stats to visualize and measure effect sizes in raw data and parameter estimates, the corresponding plotted data are returned in the workspace as under 'plotted_data.data' [lower bound highest density interval, central tendency estimate, higher bound highest density interval].

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