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* add custom data iter docs * add custom data iter docs * Update docs/source-pytorch/data/custom_data_iterables.rst * remove ToDevice * nit * Update docs/source-pytorch/data/custom_data_iterables.rst Co-authored-by: Luca Antiga <luca.antiga@gmail.com> * clarification for @lantiga * typo * Update docs/source-pytorch/data/custom_data_iterables.rst * Update docs/source-pytorch/data/custom_data_iterables.rst * Update docs/source-pytorch/data/custom_data_iterables.rst Co-authored-by: Jirka Borovec <6035284+Borda@users.noreply.github.com> Co-authored-by: Akihiro Nitta <nitta@akihironitta.com> Co-authored-by: Luca Antiga <luca.antiga@gmail.com>
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.. _dataiters: | ||
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################################## | ||
Injecting 3rd Party Data Iterables | ||
################################## | ||
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When training a model on a specific task, data loading and preprocessing might become a bottleneck. | ||
Lightning does not enforce a specific data loading approach nor does it try to control it. | ||
The only assumption Lightning makes is that the data is returned as an iterable of batches. | ||
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For PyTorch-based programs, these iterables are typically instances of :class:`~torch.utils.data.DataLoader`. | ||
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However, Lightning also supports other data types such as plain list of batches, generators or other custom iterables. | ||
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.. code-block:: python | ||
# random list of batches | ||
data = [(torch.rand(32, 3, 32, 32), torch.randint(0, 10, (32,))) for _ in range(100)] | ||
model = LitClassifier() | ||
trainer = Trainer() | ||
trainer.fit(model, data) | ||
Examples for custom iterables include `NVIDIA DALI <https://github.com/NVIDIA/DALI>`__ or `FFCV <https://github.com/libffcv/ffcv>`__ for computer vision. | ||
Both libraries offer support for custom data loading and preprocessing (also hardware accelerated) and can be used with Lightning. | ||
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For example, taking the example from FFCV's readme, we can use it with Lightning by just removing the hardcoded ``ToDevice(0)`` | ||
as Lightning takes care of GPU placement. In case you want to use some data transformations on GPUs, change the | ||
``ToDevice(0)`` to ``ToDevice(self.trainer.local_rank)`` to correctly map to the desired GPU in your pipeline. | ||
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.. code-block:: python | ||
from ffcv.loader import Loader, OrderOption | ||
from ffcv.transforms import ToTensor, ToDevice, ToTorchImage, Cutout | ||
from ffcv.fields.decoders import IntDecoder, RandomResizedCropRGBImageDecoder | ||
class CustomClassifier(LitClassifier): | ||
def train_dataloader(self): | ||
# Random resized crop | ||
decoder = RandomResizedCropRGBImageDecoder((224, 224)) | ||
# Data decoding and augmentation | ||
image_pipeline = [decoder, Cutout(), ToTensor(), ToTorchImage()] | ||
label_pipeline = [IntDecoder(), ToTensor()] | ||
# Pipeline for each data field | ||
pipelines = {"image": image_pipeline, "label": label_pipeline} | ||
# Replaces PyTorch data loader (`torch.utils.data.Dataloader`) | ||
loader = Loader( | ||
write_path, batch_size=bs, num_workers=num_workers, order=OrderOption.RANDOM, pipelines=pipelines | ||
) | ||
return loader | ||
When moving data to a specific device, you can always refer to ``self.trainer.local_rank`` to get the accelerator | ||
used by the current process. | ||
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By just changing ``device_id=0`` to ``device_id=self.trainer.local_rank`` we can also leverage DALI's GPU decoding: | ||
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.. code-block:: python | ||
from nvidia.dali.pipeline import pipeline_def | ||
import nvidia.dali.types as types | ||
import nvidia.dali.fn as fn | ||
from nvidia.dali.plugin.pytorch import DALIGenericIterator | ||
import os | ||
class CustomLitClassifier(LitClassifier): | ||
def train_dataloader(self): | ||
# To run with different data, see documentation of nvidia.dali.fn.readers.file | ||
# points to https://github.com/NVIDIA/DALI_extra | ||
data_root_dir = os.environ["DALI_EXTRA_PATH"] | ||
images_dir = os.path.join(data_root_dir, "db", "single", "jpeg") | ||
@pipeline_def(num_threads=4, device_id=self.trainer.local_rank) | ||
def get_dali_pipeline(): | ||
images, labels = fn.readers.file(file_root=images_dir, random_shuffle=True, name="Reader") | ||
# decode data on the GPU | ||
images = fn.decoders.image_random_crop(images, device="mixed", output_type=types.RGB) | ||
# the rest of processing happens on the GPU as well | ||
images = fn.resize(images, resize_x=256, resize_y=256) | ||
images = fn.crop_mirror_normalize( | ||
images, | ||
crop_h=224, | ||
crop_w=224, | ||
mean=[0.485 * 255, 0.456 * 255, 0.406 * 255], | ||
std=[0.229 * 255, 0.224 * 255, 0.225 * 255], | ||
mirror=fn.random.coin_flip(), | ||
) | ||
return images, labels | ||
train_data = DALIGenericIterator( | ||
[get_dali_pipeline(batch_size=16)], | ||
["data", "label"], | ||
reader_name="Reader", | ||
) | ||
return train_data | ||
Limitations | ||
------------ | ||
Lightning works with all kinds of custom data iterables as shown above. There are, however, a few features that cannot | ||
be supported this way. These restrictions come from the fact that for their support, | ||
Lightning needs to know a lot on the internals of these iterables. | ||
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- In a distributed multi-GPU setting (ddp), | ||
Lightning automatically replaces the DataLoader's sampler with its distributed counterpart. | ||
This makes sure that each GPU sees a different part of the dataset. | ||
As sampling can be implemented in arbitrary ways with custom iterables, | ||
there is no way for Lightning to know, how to replace the sampler. | ||
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- When training fails for some reason, Lightning is able to extract all of the relevant data from the model, | ||
optimizers, trainer and dataloader to resume it at the exact same batch it crashed. | ||
This feature is called fault-tolerance and is limited to PyTorch DataLoaders. | ||
Lighning needs to know a lot about sampling, fast forwarding and random number handling to enable fault tolerance, | ||
meaning that it cannot be supported for arbitrary iterables. |
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