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@M4I-nanoscopy

Maastricht University - M4I - Nanoscopy

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  1. tpx3HitParser tpx3HitParser Public

    Parse Timepix3 raw files to hits, clusters and events

    Python 12 1

  2. InSilicoTEM InSilicoTEM Public

    Simulator of a Transmission Electron Microscope (TEM) optimized for biological specimen.

    MATLAB 10 4

  3. geant4medipix geant4medipix Public

    Pixel based Medipix geometry with digitiser for simulating Monte Carlo and charge transport simulation as well as chip electronics.

    C++ 4 6

  4. tpx3-event-localisation tpx3-event-localisation Public

    Sub-pixel electron detection using a convolutional neural network

    Python 2

  5. mtf-nps-dqe mtf-nps-dqe Public

    Python scripts for measuring MTF and NPS, and calculating DQE.

    Python 2

  6. bioformats bioformats Public

    Forked from ome/bioformats

    Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software…

    Java 1

Repositories

Showing 10 of 19 repositories
  • tpx3HitParser Public

    Parse Timepix3 raw files to hits, clusters and events

    M4I-nanoscopy/tpx3HitParser’s past year of commit activity
    Python 12 1 0 1 Updated Jun 15, 2023
  • tpx3EventViewer Public

    Convert the sparse event stream (in HDF5) from tpx3HitParser to frames

    M4I-nanoscopy/tpx3EventViewer’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Mar 13, 2023
  • mtf-nps-dqe Public

    Python scripts for measuring MTF and NPS, and calculating DQE.

    M4I-nanoscopy/mtf-nps-dqe’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jul 20, 2022
  • InSilicoTEM Public

    Simulator of a Transmission Electron Microscope (TEM) optimized for biological specimen.

    M4I-nanoscopy/InSilicoTEM’s past year of commit activity
    MATLAB 10 4 2 0 Updated Dec 13, 2021
  • 4k-screen Public

    Scripts to run the 4k screen

    M4I-nanoscopy/4k-screen’s past year of commit activity
    Python 0 0 0 0 Updated Sep 14, 2021
  • relion Public Forked from 3dem/relion

    Image-processing software for cryo-electron microscopy

    M4I-nanoscopy/relion’s past year of commit activity
    C++ 0 202 0 0 Updated Sep 2, 2021
  • tpx3-event-localisation Public

    Sub-pixel electron detection using a convolutional neural network

    M4I-nanoscopy/tpx3-event-localisation’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Aug 12, 2020
  • omero-user-scripts Public Forked from ome/omero-user-scripts

    Plugins for OMERO

    M4I-nanoscopy/omero-user-scripts’s past year of commit activity
    Python 0 GPL-2.0 52 0 0 Updated May 25, 2020
  • bioformats Public Forked from ome/bioformats

    Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

    M4I-nanoscopy/bioformats’s past year of commit activity
    Java 1 GPL-2.0 249 0 0 Updated Apr 3, 2020
  • geant4medipix Public

    Pixel based Medipix geometry with digitiser for simulating Monte Carlo and charge transport simulation as well as chip electronics.

    M4I-nanoscopy/geant4medipix’s past year of commit activity
    C++ 4 MIT 6 1 0 Updated Mar 2, 2020
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