[FIX] Use mask, when provided, in t2smap workflow. (#545)

ME-ICA · Mar 23, 2020 · 926de14 · 926de14
1 parent 5807ea8
commit 926de14
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tedana/workflows/t2smap.py b/tedana/workflows/t2smap.py
@@ -200,7 +200,7 @@ def t2smap_workflow(data, tes, mask=None, fitmode='all', combmode='t2s',
         LGR.info('Computing adaptive mask')
     else:
         LGR.info('Using user-defined mask')
-    mask, masksum = utils.make_adaptive_mask(catd, getsum=True)
+    mask, masksum = utils.make_adaptive_mask(catd, mask=mask, getsum=True)
 
     LGR.info('Computing adaptive T2* map')
     if fitmode == 'all':