Add monthly output test and update daily output test to match

[xylar]

This merge adds a test for timeSeriesStatsMonthly on the QU240 mesh. It also updates the stream for the equivalent timeSeriesStatsDaily stream to match.

A shorter time step (30 minutes) is needed for the QU240 run to make it through a one-month simulation.

This merge requires E3SM-Project/E3SM#5026

[xylar]

@darincomeau, in the daily output, I copied and pasted the timeSeriesStatsMonthlyOutput stream from:

...E3SM/darincomeau/ocn/update-output-variables/components/mpas-ocean/default_inputs/streams.ocean.forward

after building the model. The fields are not in the order you specified them in the registry because MPAS seems to put them in the order var_struct, then var_array, then var.

[xylar]

Testing

I ran both tests on my laptop using @darincomeau's branch that updates timeSeriesStatsMonthly:

compass setup -n 98c 99c 105 106 -p ~/code/e3sm/E3SM/darincomeau/ocn/update-output-variables/components/mpas-ocean/ -w ~/data/mpas/test_20220617/qu240_daily_monthly -f ../compass/inej.cfg

I used cached versions of the mesh and init steps (98 and 99) to save a little time.

Both tests ran successfully and I verified that a handful of the new variables (e.g. zMid and atmosphericPressure) are in the output.

[xylar]

@darincomeau, could you give this a try (e.g. on Anvil)?

Clone compass, add my remote, make a worktree for this branch, and hard reset:

module load git
mkdir compass
git clone git@github.com:MPAS-Dev/compass.git master
cd master
git remote add xylar/compass git@github.com:xylar/compass.git
git fetch --all -p
git worktree add ../test_time_series_stats_monthly
cd ../test_time_series_stats_monthly
git reset --hard xylar/compass/test_time_series_stats_monthly

Now make a new environment for this testing (and install Miniconda3 if you don't already have it), using the default compiler and MPI (Intel and Intel-MPI):

./conda/configure_compass_env.py --conda ~/miniconda3 --env_name compass_daily_monthly

Assuming that works, source the load script:

source load_compass_daily_monthly_anvil_intel_impi.sh

Now build standalone MPAS-Ocean in your E3SM branch, e.g.

cd ~/e3sm_work/E3SM/darincomeau/ocn/update-output-variables
git submodule update --init --recursive
cd components/mpas-ocean
make intel-mpi

Now, you can set up the compass tests:

compass setup -n 98c 99c 105 106 -p . -w /lcrc/group/e3sm/ac.dcomeau/...

My work directory would be /lcrc/group/e3sm/ac.xylar/compass_1.1/anvil/test_20220617/qu240_daily_monthly but I'm sure you have (or want to establish) your own conventions.

Finally, submit the job:

cd /lcrc/group/e3sm/ac.dcomeau/...
sbatch compass_job_script.sh

You can also run on an interactive node, of course.

[darincomeau]

Thanks for the detailed instructions @xylar - worked flawlessly!

Test Runtimes:
00:00 PASS ocean_global_ocean_QU240_mesh
00:00 PASS ocean_global_ocean_QU240_PHC_init
00:46 PASS ocean_global_ocean_QU240_PHC_daily_output_test
05:12 PASS ocean_global_ocean_QU240_PHC_monthly_output_test
Total runtime 06:01
PASS: All passed successfully!

[darincomeau]

Approve based on above testing.

[xylar]

Thanks @darincomeau. I'll merge this once E3SM-Project/E3SM#5026 goes in and the E3SM-Project submodule gets updated.