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  1. carpenter-singh-lab/2022_Haghighi_NatureMethods carpenter-singh-lab/2022_Haghighi_NatureMethods Public

    High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations

    Jupyter Notebook 46 10

  2. broadinstitute/SingleCell_Morphological_Analysis broadinstitute/SingleCell_Morphological_Analysis Public

    Basic analysis and visualization of CellProfiler single cell profiles.

    Jupyter Notebook 3

  3. carpenter-singh-lab/2023_Haghighi_IJCAI carpenter-singh-lab/2023_Haghighi_IJCAI Public

    Pseudo-Labeling Enhanced by Privileged Information and its application to In Situ Sequencing Images

    Jupyter Notebook

  4. carpenter-singh-lab/2024_LacosteHaghighi_Cell_Mislocalization carpenter-singh-lab/2024_LacosteHaghighi_Cell_Mislocalization Public

    Cell-painting data analysis corresponding to the "Pervasive mislocalization of pathogenic coding variants underlying human diseases" paper

    Python 2